RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ALG2Q9H553 416 aa14.91□□□□□ -0.02
VLDLR-202ENST00000382099 NGRNQ9NPE2 291 aaKnown RBP14.91□□□□□ -0.02
VLDLR-202ENST00000382099 SCN3BQ9NY72 215 aa14.91□□□□□ -0.02
VLDLR-202ENST00000382099 GIMAP2Q9UG22 337 aa14.91□□□□□ -0.02
VLDLR-202ENST00000382099 TCEAL9Q9UHQ7 104 aa14.91□□□□□ -0.02
VLDLR-202ENST00000382099 GMEB2Q9UKD1 530 aa14.91□□□□□ -0.02
VLDLR-202ENST00000382099 PPEF1O14829 653 aaPredicted RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 DLX3O60479 287 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 PSMD10O75832 226 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 DNAJB5O75953 348 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 TNNC2P02585 160 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 MPOP05164 745 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ALPLP05186 524 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ARP10275 920 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 PGAM1P18669 254 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 NFYCQ13952 458 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ZNF460Q14592 562 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 GRM7Q14831 915 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 SOWAHCQ53LP3 525 aaPredicted RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 NDUFAF5Q5TEU4 345 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 TMEM65Q6PI78 240 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 FSTL5Q8N475 847 aaPredicted RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ELMO2Q96JJ3 720 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 TMEM74Q96NL1 305 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 RNF157Q96PX1 679 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 RBBP8Q99708 897 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 TEKT3Q9BXF9 490 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 RNF167Q9H6Y7 350 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 NDUFAF1Q9Y375 327 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ITGA2P17301 1181 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 KELP23276 732 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 CHRNA5P30532 468 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 BCAT1P54687 386 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 LIPEQ05469 1076 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 MGAT3Q09327 533 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 SIM2Q14190 667 aaPredicted RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 COL19A1Q14993 1142 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 POU4F3Q15319 338 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ARMCX4Q5H9R4 360 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 NOL9Q5SY16 702 aaKnown RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 HEATR6Q6AI08 1181 aaKnown RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 CLEC6AQ6EIG7 209 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 TYW3Q6IPR3 259 aaKnown RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 BEND5Q7L4P6 421 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 SH3BP5LQ7L8J4 393 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 GALNT5Q7Z7M9 940 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 RXFP2Q8WXD0 754 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 YIPF6Q96EC8 236 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 TDRD3Q9H7E2 651 aaKnown RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 CYP3A43Q9HB55 503 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 PTPRHQ9HD43 1115 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 TM9SF3Q9HD45 589 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ASNSD1Q9NWL6 643 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 SLC23A1Q9UHI7 598 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 PRMT5O14744 637 aaPredicted RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 STX7O15400 261 aaKnown RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ZNF37AP17032 561 aaPredicted RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 RPL35P42766 123 aaKnown RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 SRP54P61011 504 aaKnown RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 XKR9Q5GH70 373 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ZBTB33Q86T24 672 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 TMEM199Q8N511 208 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 DNAAF3Q8N9W5 541 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ASB12Q8WXK4 309 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 NSMCE2Q96MF7 247 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 Q96MT0 163 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 VAT1Q99536 393 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 AMBRA1Q9C0C7 1298 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 ELOVL6Q9H5J4 265 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 POMKQ9H5K3 350 aa14.9□□□□□ -0.02
VLDLR-202ENST00000382099 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.9□□□□□ -0.02
VLDLR-202ENST00000382099 LOC100130705A0A1B0GUX0 176 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 TCP10L2B9ZVM9 353 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 FCER2P06734 321 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 PROS1P07225 676 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 LIMK2P53671 638 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 DMP1Q13316 513 aaPredicted RBP14.89□□□□□ -0.03
VLDLR-202ENST00000382099 ACOX1Q15067 660 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 NT5DC4Q86YG4 428 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 MFSD14AQ96MC6 490 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 CAMKK2Q96RR4 588 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 PEBP4Q96S96 227 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 IL22Q9GZX6 179 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 DTLQ9NZJ0 730 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 FAM20BO75063 409 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 USP2O75604 605 aaPredicted RBP14.89□□□□□ -0.03
VLDLR-202ENST00000382099 DNAJB1P25685 340 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 APLP1P51693 650 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 PTPN5P54829 565 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 JAG1P78504 1218 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 SP4Q02446 784 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 VARS2Q5ST30 1063 aaKnown RBP14.89□□□□□ -0.03
VLDLR-202ENST00000382099 FAM102AQ5T9C2 384 aaPredicted RBP14.89□□□□□ -0.03
VLDLR-202ENST00000382099 NIPA2Q8N8Q9 360 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 TMCO6Q96DC7 493 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 HOPXQ9BPY8 73 aaPredicted RBP14.89□□□□□ -0.03
VLDLR-202ENST00000382099 BCL7BQ9BQE9 202 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 TPRKBQ9Y3C4 175 aa14.89□□□□□ -0.03
VLDLR-202ENST00000382099 ORC6Q9Y5N6 252 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms