RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CLIP3Q96DZ5 547 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 ZCWPW1Q9H0M4 648 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 PCDH12Q9NPG4 1184 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 TRAF6Q9Y4K3 522 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 ZFP37Q9Y6Q3 630 aaPredicted RBP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 KLRG2A4D1S0 409 aaPredicted RBP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 OR10H3O60404 316 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 PEX11AO75192 247 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 LRIG2O94898 1065 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CSNK2BP67870 215 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 DLG1Q12959 904 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 SF3B4Q15427 424 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CPSF6Q16630 551 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 FBXO43Q4G163 708 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 MIIPQ5JXC2 388 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 COLEC12Q5KU26 742 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 EMC10Q5UCC4 262 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 BROXQ5VW32 411 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 ZC3H14Q6PJT7 736 aaKnown RBP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 ZCCHC7Q8N3Z6 543 aaKnown RBP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CHCHD4Q8N4Q1 142 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 NAT16Q8N8M0 369 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 PCED1BQ96HM7 432 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 PELOQ9BRX2 385 aaKnown RBP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 PHF11Q9UIL8 331 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 COQ4Q9Y3A0 265 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 GMPPBQ9Y5P6 360 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 A8MX80 341 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 UGT2B11O75310 529 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 AP2A2O94973 939 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 UROSP10746 265 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 PRDX6P30041 224 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CAPGP40121 348 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CBX5P45973 191 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CASP5P51878 434 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 RHAGQ02094 409 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 DHDDSQ86SQ9 333 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 ARL14EPQ8N8R7 260 aaPredicted RBP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 KCTD4Q8WVF5 259 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 RFKQ969G6 155 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 FCRL5Q96RD9 977 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 SLC4A5Q9BY07 1137 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 TRIM2Q9C040 744 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 BPIFA1Q9NP55 256 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 IFT80Q9P2H3 777 aaPredicted RBP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 MBD2Q9UBB5 411 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 IKZF3Q9UKT9 509 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CDH7Q9ULB5 785 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 NFAT5O94916 1531 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 RIIAD1A6NNX1 92 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 H0YC42 278 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 TMX2-CTNND1H3BSU7 103 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CLDN5O00501 218 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 STBD1O95210 358 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 GJB6O95452 261 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 MATN4O95460 622 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 COX4I1P13073 169 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 NT5EP21589 574 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CRHR1P34998 444 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 DHPSP49366 369 aaPredicted RBP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 GRIK5Q16478 980 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 HKDC1Q2TB90 917 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 ZNF311Q5JNZ3 666 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 FNBP1LQ5T0N5 605 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 DNM1P34Q6PK57 102 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CES3Q6UWW8 571 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 TAC4Q86UU9 113 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CREG2Q8IUH2 290 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 SEMA4DQ92854 862 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 LGMNQ99538 433 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 RSPH9Q9H1X1 276 aaPredicted RBP7.11□□□□□ -1.27
CCDC171-201ENST00000380701 RASSF1Q9NS23 344 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 COMMD9Q9P000 198 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 CNTN3Q9P232 1028 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 SEC14L3Q9UDX4 400 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 PSMD13Q9UNM6 376 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 PCDHB3Q9Y5E6 796 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 PCDHGB7Q9Y5F8 929 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 LYVE1Q9Y5Y7 322 aa7.11□□□□□ -1.27
CCDC171-201ENST00000380701 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 APBB3O95704 486 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NTRK1P04629 796 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 PCCBP05166 539 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 GDI1P31150 447 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 MYBPC1Q00872 1141 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 ARHGAP1Q07960 439 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 FUT2Q10981 343 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 SP140Q13342 867 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 PRR23BQ6ZRT6 265 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 TMPRSS11BQ86T26 416 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 KLHL6Q8WZ60 621 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 SMPDL3AQ92484 453 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 EPYCQ99645 322 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 REXO4Q9GZR2 422 aaKnown RBP7.1□□□□□ -1.27
CCDC171-201ENST00000380701 SUV39H2Q9H5I1 410 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 CMTM6Q9NX76 183 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 GDAP2Q9NXN4 497 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 IGLV3-22A0A075B6J6 115 aa7.1□□□□□ -1.27
CCDC171-201ENST00000380701 NRP1O14786 923 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms