RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 PEX1O43933 1283 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 PRAMEF1O95521 474 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 ESRRBO95718 433 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 C8AP07357 584 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 ALPIP09923 528 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 UROSP10746 265 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 CLCN7P51798 805 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 PTPN5P54829 565 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 SNRPD1P62314 119 aaKnown RBP12.49□□□□□ -0.41
VPS16-202ENST00000380445 RPS6KA2Q15349 733 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 LILRA6Q6PI73 481 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 RNF111Q6ZNA4 994 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 TPGS1Q6ZTW0 290 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 ADAMTSL2Q86TH1 951 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 MIER2Q8N344 545 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 RIN3Q8TB24 985 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 HMGCLL1Q8TB92 370 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 PPP2R3CQ969Q6 453 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 ASB9Q96DX5 294 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 TRAPPC9Q96Q05 1148 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 HGH1Q9BTY7 390 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 LRRC3Q9BY71 257 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 ASAH2Q9NR71 780 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 CROTQ9UKG9 612 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 PCTPQ9UKL6 214 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 ADAMTS6Q9UKP5 1117 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 PACSIN3Q9UKS6 424 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 TNPO3Q9Y5L0 923 aaKnown RBP12.49□□□□□ -0.41
VPS16-202ENST00000380445 H3BNX3 289 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 PPP6CO00743 305 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 ATP6V1G1O75348 118 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 CXCL14O95715 111 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 IDO1P14902 403 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 DPP6P42658 865 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 RGS4P49798 205 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 PTPRRQ15256 657 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 FRA10AC1Q70Z53 315 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 SPATA19Q7Z5L4 167 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 SERPINA9Q86WD7 417 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 HS6ST3Q8IZP7 471 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 OR2AP1Q8NGE2 309 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 GRIN3AQ8TCU5 1115 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 GDPD5Q8WTR4 605 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 EID2BQ96D98 161 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 ASB8Q9H765 288 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 ZDHHC7Q9NXF8 308 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 IKZF3Q9UKT9 509 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 NDUFAF1Q9Y375 327 aa12.49□□□□□ -0.41
VPS16-202ENST00000380445 A0A1W2PRU2 124 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 NCF1BA6NI72 391 aaPredicted RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 NCF1CA8MVU1 366 aaPredicted RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 FBP2O00757 339 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 MATN4O95460 622 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 S100BP04271 92 aaPredicted RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 ALDOCP09972 364 aaKnown RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 NCF1P14598 390 aaPredicted RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 GPX3P22352 226 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 FOXA1P55317 472 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 GRIK2Q13002 908 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 NFATC2Q13469 925 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 TRIM25Q14258 630 aaKnown RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 TGFBIQ15582 683 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 TRIP10Q15642 601 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 GPR33Q49SQ1 333 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 GRAMD4Q6IC98 578 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 OGFOD2Q6N063 350 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 PQLC1Q8N2U9 271 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 CBARPQ8N350 705 aaPredicted RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 KREMEN2Q8NCW0 462 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 BHLHE22Q8NFJ8 381 aaPredicted RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 OR6K2Q8NGY2 324 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 C11orf49Q9H6J7 331 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 FBRSL1Q9HCM7 1045 aaKnown RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 PLK2Q9NYY3 685 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 KIAA1671Q9BY89 1806 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 CAPN8A6NHC0 703 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 LEFTY2O00292 366 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 PRAMEF12O95522 483 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 STAMBPO95630 424 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 FGF19O95750 216 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 HGFP14210 728 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 TRAP1Q12931 704 aaKnown RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 RBBP7Q16576 425 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 SAMD4BQ5PRF9 694 aaKnown RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 OR52E8Q6IFG1 317 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 PAOXQ6QHF9 649 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 FAM151BQ6UXP7 276 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 PDSS2Q86YH6 399 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 CHCHD4Q8N4Q1 142 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 PCDH20Q8N6Y1 951 aaKnown RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 CATSPER1Q8NEC5 780 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 TSPEARQ8WU66 669 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 UCMAQ8WVF2 138 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 GATA6Q92908 595 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 ISG20Q96AZ6 181 aaKnown RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 LRGUKQ96M69 825 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 HOPXQ9BPY8 73 aaPredicted RBP12.48□□□□□ -0.41
VPS16-202ENST00000380445 EMILIN2Q9BXX0 1053 aa12.48□□□□□ -0.41
VPS16-202ENST00000380445 POLG2Q9UHN1 485 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms