RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 DSELQ8IZU8 1212 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 SLC44A3Q8N4M1 653 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 RP9Q8TA86 221 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 IMP4Q96G21 291 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 RANBP9Q96S59 729 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 SLC25A51Q9H1U9 297 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 WDR55Q9H6Y2 383 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 MEAF6Q9HAF1 191 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 KCNK12Q9HB15 430 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 IARS2Q9NSE4 1012 aaKnown RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 C6orf203Q9P0P8 240 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 SEPT10Q9P0V9 454 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 KLHL8Q9P2G9 620 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 UBA2Q9UBT2 640 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-202ENST00000379996 DUSP12Q9UNI6 340 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 PSMD13Q9UNM6 376 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 PCDHGA7Q9Y5G6 932 aa7.68□□□□□ -1.18
CDKL5-202ENST00000379996 CEP290O15078 2479 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 RGSL1A5PLK6 1076 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 H3BQ06 376 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 DFFAO00273 331 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 DNAJA2O60884 412 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 BCAS2O75934 225 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 EPOP01588 193 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 VCLP18206 1134 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CD70P32970 193 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 GJA4P35212 333 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 SLC1A2P43004 574 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 DGKGP49619 791 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 MPP1Q00013 466 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CYTH1Q15438 398 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 TCHHL1Q5QJ38 904 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 GRAMD4Q6IC98 578 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 PGAM4Q8N0Y7 254 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 BBS5Q8N3I7 341 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 PPP4R1Q8TF05 950 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 VOPP1Q96AW1 172 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 UBXN10Q96LJ8 280 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 KXD1Q9BQD3 176 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 SP110Q9HB58 689 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 POLR3BQ9NW08 1133 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 NSMCE4AQ9NXX6 385 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 LHX3Q9UBR4 397 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 VPS51Q9UID3 782 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CLEC4EQ9ULY5 219 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 AAR2Q9Y312 384 aaKnown RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 TCAF1Q9Y4C2 921 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 COPG1Q9Y678 874 aaKnown RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 PRRC2BQ5JSZ5 2229 aaKnown RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 TSPAN11A1L157 253 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 OTOL1A6NHN0 477 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 FBP2O00757 339 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 UBTFL6P0CB48 400 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 XRCC1P18887 633 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 TFEBP19484 476 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 PSMA3P25788 255 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 MXRA7P84157 204 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 ZP2Q05996 745 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 GALNT1Q10472 559 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 LRP8Q14114 963 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 LIN52Q52LA3 116 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 MARC1Q5VT66 337 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CNSTQ6PJW8 725 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CYP2U1Q7Z449 544 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 DENND6AQ8IWF6 608 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 METTL25Q8N6Q8 603 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 PCDH20Q8N6Y1 951 aaKnown RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CCNYQ8ND76 341 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 SPATA22Q8NHS9 363 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 KCTD4Q8WVF5 259 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 SLCO4A1Q96BD0 722 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 MYO19Q96H55 970 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CELF6Q96J87 481 aaKnown RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 TTC1Q99614 292 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 TBL1YQ9BQ87 522 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CPEB1Q9BZB8 566 aaKnown RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 GLOD4Q9HC38 313 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 SLC52A3Q9NQ40 469 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 BFARQ9NZS9 450 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CD300AQ9UGN4 299 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 SLC2A6Q9UGQ3 507 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CNOT11Q9UKZ1 510 aaKnown RBP7.67□□□□□ -1.18
CDKL5-202ENST00000379996 REV3LO60673 3130 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 CKAP5Q14008 2032 aa7.67□□□□□ -1.18
CDKL5-202ENST00000379996 A0A1W2PQ67 120 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 MROH6A6NGR9 719 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 J3KR12 359 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 AURKAO14965 403 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 TULP3O75386 442 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 ZNF821O75541 412 aaPredicted RBP7.66□□□□□ -1.18
CDKL5-202ENST00000379996 SNUPNO95149 360 aaKnown RBP7.66□□□□□ -1.18
CDKL5-202ENST00000379996 HLA-DQB2P05538 268 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 GDI1P31150 447 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 AP1S1P61966 158 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 ZNF460Q14592 562 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 PCID2Q5JVF3 399 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 C6orf10Q5SRN2 563 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 TMEM198Q66K66 360 aa7.66□□□□□ -1.18
CDKL5-202ENST00000379996 KIAA0930Q6ICG6 404 aaPredicted RBP7.66□□□□□ -1.18
CDKL5-202ENST00000379996 TMEM207Q6UWW9 146 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms