RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PPP3CAQ08209 521 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TNK1Q13470 666 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 LTB4RQ15722 352 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PNCKQ6P2M8 343 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PHF13Q86YI8 300 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 LIX1LQ8IVB5 337 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PARP16Q8N5Y8 322 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PPTC7Q8NI37 304 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 RSAD2Q8WXG1 361 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ST8SIA4Q92187 359 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 AKAP1Q92667 903 aaKnown RBP eCLIP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 FOPNLQ96NB1 174 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 GPR20Q99678 358 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TMEM168Q9H0V1 697 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SAV1Q9H4B6 383 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PDZD7Q9H5P4 517 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF385DQ9H6B1 395 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 BCAS3Q9H6U6 928 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 CYP3A43Q9HB55 503 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TLR9Q9NR96 1032 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SMYD2Q9NRG4 433 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SDHAF3Q9NRP4 125 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SPATA6Q9NWH7 488 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF224Q9NZL3 707 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SLC23A1Q9UHI7 598 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 NUFIP1Q9UHK0 495 aaKnown RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TLK1Q9UKI8 766 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 COPS3Q9UNS2 423 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TNFSF13BQ9Y275 285 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ANKRD6Q9Y2G4 727 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 F8W036 122 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 BTN3A1O00481 513 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ZBTB39O15060 712 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 RGS5O15539 181 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 TPST1O60507 370 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 CHRNA1P02708 482 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ALBP02768 609 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 NFX1Q12986 1120 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF273Q14593 569 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 STARD3Q14849 445 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF124Q15973 351 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 CA9Q16790 459 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 BTBD16Q32M84 506 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 TBCELQ5QJ74 424 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 RETSATQ6NUM9 610 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 NRARPQ7Z6K4 114 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ARL6IP6Q8N6S5 226 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PTP4A1Q93096 173 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 KLHL15Q96M94 604 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PARK7Q99497 189 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 FZD8Q9H461 694 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PAK1IP1Q9NWT1 392 aaPredicted RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 REV1Q9UBZ9 1251 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 OSGIN1Q9UJX0 560 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 AGO1Q9UL18 857 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 MKL2Q9ULH7 1088 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 HRH3Q9Y5N1 445 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 TEX264Q9Y6I9 313 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PLXNB2O15031 1838 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 RALGAPA2Q2PPJ7 1873 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PLXNA1Q9UIW2 1896 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 HEATR9A2RTY3 570 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 MEIOCA2RUB1 952 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 SLC15A5A6NIM6 579 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 HACD1B0YJ81 288 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 MED7O43513 233 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ITGAVP06756 1048 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 STMN1P16949 149 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 TNNI3P19429 210 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ATP6V1B2P21281 511 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PRKAR1BP31321 381 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PTPN7P35236 360 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 RPS9P46781 194 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 DEFA1P59665 94 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 DEFA3P59666 94 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 BAMBIQ13145 260 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ACOX1Q15067 660 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 SGCAQ16586 387 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 LRRC26Q2I0M4 334 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ATP13A4Q4VNC1 1196 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 VARS2Q5ST30 1063 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 TREML2Q5T2D2 321 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 N4BP2L1Q5TBK1 243 aaPredicted RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 MROH9Q5TGP6 573 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 TMEM198Q66K66 360 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 SV2AQ7L0J3 742 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 KIF18BQ86Y91 864 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 RHOT1Q8IXI2 618 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 DDIASQ8IXT1 998 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 CMTR2Q8IYT2 770 aaKnown RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 NLGN2Q8NFZ4 835 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 MAGEE2Q8TD90 523 aaPredicted RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 KLHL6Q8WZ60 621 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 ELMO1Q92556 727 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 RIT1Q92963 219 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 TNIP3Q96KP6 325 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PPP1R36Q96LQ0 422 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 TINAGL1Q9GZM7 467 aaPredicted RBP7.42□□□□□ -1.22
CDKL5-201ENST00000379989 PCIF1Q9H4Z3 704 aa7.42□□□□□ -1.22
CDKL5-201ENST00000379989 CCM2LQ9NUG4 571 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms