RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 CES5AQ6NT32 575 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 INTS5Q6P9B9 1019 aaKnown RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ZBTB33Q86T24 672 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 FAM124AQ86V42 546 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ATG16L2Q8NAA4 619 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 OR4D10Q8NGI6 311 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 OR6M1Q8NGM8 313 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 YIPF5Q969M3 257 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 SLC47A1Q96FL8 570 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 MYRFLQ96LU7 910 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 OR2A14Q96R47 310 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 VAT1Q99536 393 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 KCNS3Q9BQ31 491 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 TMEM47Q9BQJ4 181 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 SH2D3AQ9BRG2 576 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 TRIM8Q9BZR9 551 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 NIPAL2Q9H841 368 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ARNT2Q9HBZ2 717 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 MTMR4Q9NYA4 1195 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 KIF17Q9P2E2 1029 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ZNF639Q9UID6 485 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ZDHHC2Q9UIJ5 367 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 TSR3Q9UJK0 312 aaKnown RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 INTS6Q9UL03 887 aaKnown RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 LAMB2P55268 1798 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 FAM86B1E9PN63 330 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 NOBOXO60393 691 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 C1QBP02746 253 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 SNRPB2P08579 225 aaKnown RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 HLA-FP30511 346 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 RECQLP46063 649 aaPredicted RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 RPS5P46782 204 aaKnown RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 AP1S2P56377 157 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 GABARAPL2P60520 117 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 CBX2Q14781 532 aaPredicted RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 PTPRRQ15256 657 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 AOC3Q16853 763 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 LAMTOR1Q6IAA8 161 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ERICH5Q6P6B1 374 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 GPAT4Q86UL3 456 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 STX12Q86Y82 276 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ATAD1Q8NBU5 361 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 CNIH3Q8TBE1 160 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 NANPQ8TBE9 248 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 FEZF2Q8TBJ5 459 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 DDX1Q92499 740 aaKnown RBP8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 KLHL15Q96M94 604 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 SPNS1Q9H2V7 528 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 STARD7Q9NQZ5 370 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 FAM49BQ9NUQ9 324 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 ANAPC2Q9UJX6 822 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 PEX16Q9Y5Y5 336 aa8.44□□□□□ -1.06
NHLRC3-201ENST00000379599 TTLL8A6PVC2 850 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 TMEM233B4DJY2 109 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 LRCH4O75427 683 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 NDUFB10O96000 172 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 MT-CO1P00395 513 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 FGRP09769 529 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 UNGP13051 313 aaPredicted RBP8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 JUPP14923 745 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 ARSAP15289 507 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 FMO3P31513 532 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 PSMD8P48556 350 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 NAGLUP54802 743 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 BAMBIQ13145 260 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 DAG1Q14118 895 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 ZNF169Q14929 603 aaPredicted RBP8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 PSMD5Q16401 504 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 ODR4Q5SWX8 454 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 FAM180BQ6P0A1 224 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 TSPYL5Q86VY4 417 aaPredicted RBP8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 JAZF1Q86VZ6 243 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 TCTE3Q8IZS6 198 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 EMC1Q8N766 993 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 CLHC1Q8NHS4 586 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 STON2Q8WXE9 905 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 FOXJ1Q92949 421 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 ELMO2Q96JJ3 720 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 COPS4Q9BT78 406 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 SMURF2Q9HAU4 748 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 TLR9Q9NR96 1032 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 DNAJC11Q9NVH1 559 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 USE1Q9NZ43 259 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 AASSQ9UDR5 926 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 VPS9D1Q9Y2B5 631 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 PTPRFP10586 1907 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 SGCEO43556 437 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 WDR47O94967 919 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 STAU1O95793 577 aaKnown RBP8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 GCP02774 474 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 SLC2A3P11169 496 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 DSG3P32926 999 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 GNPDA1P46926 289 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 PER3P56645 1201 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 SEMA3BQ13214 749 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 CAPRIN1Q14444 709 aaKnown RBP8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 IRF3Q14653 427 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 PDK2Q15119 407 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 TUSC1Q2TAM9 212 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms