RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CCDC103Q8IW40 242 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 MFSD4AQ8N468 514 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 RNF148Q8N7C7 305 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 COLGALT1Q8NBJ5 622 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 CCNYQ8ND76 341 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 RNF139Q8WU17 664 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 SPATA13Q96N96 652 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 CSF3RQ99062 836 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 NPY6RQ99463 290 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 TSEN34Q9BSV6 310 aaKnown RBP15.4■□□□□ 0.06
FXN-201ENST00000377270 CEP41Q9BYV8 373 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 SLC6A17Q9H1V8 727 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 COG4Q9H9E3 785 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 MTRRQ9UBK8 725 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 PRSS44E7EML9 344 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 IFNA16P05015 189 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 PSKH1P11801 424 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 CD1EP15812 388 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 ARPP19P56211 112 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 SCRN3Q0VDG4 424 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 BRMS1LQ5PSV4 323 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 CASC4Q6P4E1 433 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 C10orf107Q8IVU9 208 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 BBS7Q8IWZ6 715 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 CDH26Q8IXH8 852 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 PGAM4Q8N0Y7 254 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 RCOR3Q9P2K3 495 aaPredicted RBP15.4■□□□□ 0.06
FXN-201ENST00000377270 STAP1Q9ULZ2 295 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 RPH3AQ9Y2J0 694 aaPredicted RBP15.4■□□□□ 0.06
FXN-201ENST00000377270 PCDHA11Q9Y5I1 949 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 TIMM13Q9Y5L4 95 aaPredicted RBP15.4■□□□□ 0.06
FXN-201ENST00000377270 HTRA2O43464 458 aaPredicted RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 PLIN3O60664 434 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 PDGFAP04085 211 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 ZNF3P17036 446 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 MAPKAPK2P49137 400 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 PURAQ00577 322 aaKnown RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 TAF1CQ15572 869 aaPredicted RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 DESI1Q6ICB0 168 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 ERMP1Q7Z2K6 904 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 PSTKQ8IV42 348 aaKnown RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 CCDC36Q8IYA8 594 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 KCTD13Q8WZ19 329 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 NT5C3BQ969T7 300 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 ATP6V1E2Q96A05 226 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 HDAC11Q96DB2 347 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 P2RY11Q96G91 374 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 SENP8Q96LD8 212 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 CDADC1Q9BWV3 514 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 PIH1D1Q9NWS0 290 aaKnown RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 ADGRE2Q9UHX3 823 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 WBP11Q9Y2W2 641 aaKnown RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 WDR27A2RRH5 827 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 FAM159BA6NKW6 160 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 A8MV72 311 aaPredicted RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 GABRDO14764 452 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 NDST3O95803 873 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 BMP4P12644 408 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 HOXB3P14651 431 aaPredicted RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 PCSK2P16519 638 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 IL10P22301 178 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 TSPAN7P41732 249 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 NUMBP49757 651 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 AFF1P51825 1210 aaKnown RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 CRADDP78560 199 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 UBE3AQ05086 875 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 SLC9B1Q4ZJI4 515 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 GOT1L1Q8NHS2 421 aaPredicted RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 RP9Q8TA86 221 aaKnown RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 ADAM32Q8TC27 787 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 DEPDC1BQ8WUY9 529 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 WNT8BQ93098 351 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 GLT1D1Q96MS3 346 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 GPN2Q9H9Y4 310 aaPredicted RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 CRTAC1Q9NQ79 661 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 SDHAF3Q9NRP4 125 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 PIGVQ9NUD9 493 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 ACOXLQ9NUZ1 547 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.39■□□□□ 0.05
FXN-201ENST00000377270 PMF1-BGLAPU3KQ54 211 aa15.39■□□□□ 0.05
FXN-201ENST00000377270 MYO18AQ92614 2054 aaKnown RBP15.39■□□□□ 0.05
FXN-201ENST00000377270 NRP1O14786 923 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 GLRA3O75311 464 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 ITGA2P17301 1181 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 GLDCP23378 1020 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 ERAP2Q6P179 960 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 SLC7A14Q8TBB6 771 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 LRTOMTQ8WZ04 291 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 TESCQ96BS2 214 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 GAD1Q99259 594 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 ULBP1Q9BZM6 244 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 WDR41Q9HAD4 459 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 GLTPQ9NZD2 209 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 IPO11Q9UI26 975 aaKnown RBP15.38■□□□□ 0.05
FXN-201ENST00000377270 PCDHGA7Q9Y5G6 932 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 CDY2AQ9Y6F7 541 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 CDY1Q9Y6F8 540 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 EEF2KO00418 725 aaKnown RBP15.38■□□□□ 0.05
FXN-201ENST00000377270 SSX5O60225 188 aa15.38■□□□□ 0.05
FXN-201ENST00000377270 CDK14O94921 469 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms