RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 DFNA5O60443 496 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 LRP3O75074 770 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 CER1O95813 267 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 TNFP01375 233 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 CEACAM5P06731 702 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 OR56A5P0C7T3 313 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 ZNF8P17098 575 aaPredicted RBP13.01□□□□□ -0.33
TIMP1-202ENST00000377017 RPS3P23396 243 aaKnown RBP eCLIP13.01□□□□□ -0.336e-9■■■■■ 47
TIMP1-202ENST00000377017 CTSKP43235 329 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 ARRB1P49407 418 aaPredicted RBP13.01□□□□□ -0.33
TIMP1-202ENST00000377017 ADARP55265 1226 aaKnown RBP13.01□□□□□ -0.33
TIMP1-202ENST00000377017 CTBP1Q13363 440 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 FZD2Q14332 565 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 SEMA3AQ14563 771 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 KBTBD12Q3ZCT8 623 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 LDB1Q86U70 411 aaPredicted RBP13.01□□□□□ -0.33
TIMP1-202ENST00000377017 LRRTM4Q86VH4 590 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 TRAPPC5Q8IUR0 188 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 DENND6AQ8IWF6 608 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 CPNE1Q99829 537 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 CCDC77Q9BR77 488 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 SLC13A1Q9BZW2 595 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 CARS2Q9HA77 564 aaKnown RBP13.01□□□□□ -0.33
TIMP1-202ENST00000377017 CAPN10Q9HC96 672 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 CYP4F12Q9HCS2 524 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 FGF22Q9HCT0 170 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 FBXO6Q9NRD1 293 aaPredicted RBP13.01□□□□□ -0.33
TIMP1-202ENST00000377017 GNPTGQ9UJJ9 305 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 CORO1CQ9ULV4 474 aaPredicted RBP13.01□□□□□ -0.33
TIMP1-202ENST00000377017 GPR34Q9UPC5 381 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 IKBKGQ9Y6K9 419 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 DGKBQ9Y6T7 804 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 RALGAPA1Q6GYQ0 2036 aa13.01□□□□□ -0.33
TIMP1-202ENST00000377017 CACNA1EQ15878 2313 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 KLHL33A6NCF5 533 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 PROB1E7EW31 1015 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 KMOO15229 486 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 YKT6O15498 198 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 GRID2O43424 1007 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 S1PR4O95977 384 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 ESR1P03372 595 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 GSTM1P09488 218 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 VCLP18206 1134 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 CA5AP35218 305 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 GNPDA1P46926 289 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 LEPRP48357 1165 aaKnown RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 CD151P48509 253 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 POLD2P49005 469 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 HK3P52790 923 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 ATXN3P54252 364 aaPredicted RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 CSE1LP55060 971 aaKnown RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 EIF3BP55884 814 aaKnown RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 HNRNPKP61978 463 aaKnown RBP eCLIP13□□□□□ -0.339e-6■■■□□ 18.9
TIMP1-202ENST00000377017 MPP1Q00013 466 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 GSTM4Q03013 218 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 GRIK2Q13002 908 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 ALG11Q2TAA5 492 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 KIF19Q2TAC6 998 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 BCL7AQ4VC05 210 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 KHDC1Q4VXA5 237 aaKnown RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 PLA2G2CQ5R387 149 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 TPRG1LQ5T0D9 272 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 ZNF648Q5T619 568 aaPredicted RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 PTRHD1Q6GMV3 140 aaKnown RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 TMEM220Q6QAJ8 160 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 MARK2Q7KZI7 788 aaKnown RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 DET1Q7L5Y6 550 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 RD3Q7Z3Z2 195 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 SPATS2Q86XZ4 545 aaKnown RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 HID1Q8IV36 788 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 PHACTR4Q8IZ21 702 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 CNPY4Q8N129 248 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 PPM1NQ8N819 430 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 LPGAT1Q92604 370 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 PDXPQ96GD0 296 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 SCARF2Q96GP6 870 aaPredicted RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 PANX3Q96QZ0 392 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 OR2M4Q96R27 311 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 BOCQ9BWV1 1114 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 DNAJC28Q9NX36 388 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 APOBEC3BQ9UH17 382 aaKnown RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 ZNHIT2Q9UHR6 403 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 RABGEF1Q9UJ41 708 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 SUFUQ9UMX1 484 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 SNX11Q9Y5W9 270 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 COMMD10Q9Y6G5 202 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 DNMT3AQ9Y6K1 912 aaPredicted RBP13□□□□□ -0.33
TIMP1-202ENST00000377017 LRP4O75096 1905 aa13□□□□□ -0.33
TIMP1-202ENST00000377017 MUC6Q6W4X9 2439 aa12.99□□□□□ -0.33
TIMP1-202ENST00000377017 EXOC1LA0A1B0GW35 172 aa12.99□□□□□ -0.33
TIMP1-202ENST00000377017 OR2AG2A6NM03 316 aa12.99□□□□□ -0.33
TIMP1-202ENST00000377017 PATE3B3GLJ2 98 aa12.99□□□□□ -0.33
TIMP1-202ENST00000377017 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
TIMP1-202ENST00000377017 CHUKO15111 745 aa12.99□□□□□ -0.33
TIMP1-202ENST00000377017 OR1I1O60431 355 aa12.99□□□□□ -0.33
TIMP1-202ENST00000377017 FOXD2O60548 495 aaPredicted RBP12.99□□□□□ -0.33
TIMP1-202ENST00000377017 KCNJ13O60928 360 aa12.99□□□□□ -0.33
TIMP1-202ENST00000377017 DNAJC6O75061 913 aa12.99□□□□□ -0.33
TIMP1-202ENST00000377017 FTH1P02794 183 aa12.99□□□□□ -0.33
TIMP1-202ENST00000377017 CSF2P04141 144 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms