RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ARPP19P56211 112 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 STX1BP61266 288 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 CARTPTQ16568 116 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 CTF1Q16619 201 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 KIF19Q2TAC6 998 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 SLC22A16Q86VW1 577 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 COLEC11Q9BWP8 271 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 NMUR1Q9HB89 426 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 OSER1Q9NX31 292 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 GMIPQ9P107 970 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 ENPP5Q9UJA9 477 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 IFT52Q9Y366 437 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 MYO16Q9Y6X6 1858 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 AURKAO14965 403 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 BMP4P12644 408 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 ERCC2P18074 760 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 DSC1Q08554 894 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 MAPK11Q15759 364 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 DPY19L1Q2PZI1 675 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 RNF135Q8IUD6 432 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 PDZD8Q8NEN9 1154 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 PHF21BQ96EK2 531 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 MAGED4Q96JG8 741 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 GPR62Q9BZJ7 368 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 LTB4R2Q9NPC1 389 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 FBXW11Q9UKB1 542 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 BBIP1A8MTZ0 92 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 ENPP3O14638 875 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 UGT2B11O75310 529 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 DNAJB1P25685 340 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 GSK3BP49841 420 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 ATP4BP51164 291 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 CCL23P55773 120 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 CSHL1Q14406 222 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 SKIV2LQ15477 1246 aaKnown RBP12.82□□□□□ -0.36
MSH5-204ENST00000375755 NDUFA5Q16718 116 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 IMPG1Q17R60 797 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 PRMT9Q6P2P2 845 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 VMP1Q96GC9 406 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 CELF6Q96J87 481 aaKnown RBP12.82□□□□□ -0.36
MSH5-204ENST00000375755 ELMO2Q96JJ3 720 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 SEPHS2Q99611 448 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 CENPOQ9BU64 300 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 SIK2Q9H0K1 926 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 EML4Q9HC35 981 aaKnown RBP12.82□□□□□ -0.36
MSH5-204ENST00000375755 IGSF5Q9NSI5 407 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 NSMCE4AQ9NXX6 385 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 RCOR3Q9P2K3 495 aaPredicted RBP12.82□□□□□ -0.36
MSH5-204ENST00000375755 ANAPC2Q9UJX6 822 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 PCDHGA11Q9Y5H2 935 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 ANKRD34BA5PLL1 514 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 NFKB1P19838 968 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 NR4A2P43354 598 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 ACAP2Q15057 778 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 PAFAH1B3Q15102 231 aaKnown RBP12.81□□□□□ -0.36
MSH5-204ENST00000375755 FAM83EQ2M2I3 478 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 RABL3Q5HYI8 236 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 PAGE2BQ5JRK9 111 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 RSPO2Q6UXX9 243 aaPredicted RBP12.81□□□□□ -0.36
MSH5-204ENST00000375755 KIAA0408Q6ZU52 694 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 SPATA2LQ8IUW3 424 aaPredicted RBP12.81□□□□□ -0.36
MSH5-204ENST00000375755 TBC1D21Q8IYX1 336 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 ATAD1Q8NBU5 361 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 GABPB2Q8TAK5 448 aaPredicted RBP12.81□□□□□ -0.36
MSH5-204ENST00000375755 CAPSLQ8WWF8 208 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 BTN2A3PQ96KV6 586 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 DEFB118Q96PH6 123 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 RMND5AQ9H871 391 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 USP22Q9UPT9 525 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 NDUFAF1Q9Y375 327 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 MAGED1Q9Y5V3 778 aaPredicted RBP12.81□□□□□ -0.36
MSH5-204ENST00000375755 PTGDR2Q9Y5Y4 395 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 C5orf42Q9H799 3197 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 DCLK1O15075 740 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 ANGPT2O15123 496 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 IPO13O94829 963 aaKnown RBP12.81□□□□□ -0.36
MSH5-204ENST00000375755 NEK2P51955 445 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 FAM189BP81408 668 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 TECRLQ5HYJ1 363 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 ATAD3BQ5T9A4 648 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 PM20D1Q6GTS8 502 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 TAS1R1Q7RTX1 841 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 SCD5Q86SK9 330 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 ZCCHC7Q8N3Z6 543 aaKnown RBP12.81□□□□□ -0.36
MSH5-204ENST00000375755 PAPD5Q8NDF8 572 aaKnown RBP12.81□□□□□ -0.36
MSH5-204ENST00000375755 S100ZQ8WXG8 99 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 MUL1Q969V5 352 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 LRRC58Q96CX6 371 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.81□□□□□ -0.367e-6■■■■□ 23.5
MSH5-204ENST00000375755 WDCPQ9H6R7 721 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 AKTIPQ9H8T0 292 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 PCDHA9Q9Y5H5 950 aa12.81□□□□□ -0.36
MSH5-204ENST00000375755 TNFRSF10BO14763 440 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 FKTNO75072 461 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 INMTO95050 263 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 TCF3P15923 654 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 GP2P55259 537 aaKnown RBP12.8□□□□□ -0.36
MSH5-204ENST00000375755 GEN1Q17RS7 908 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 BTBD8Q5XKL5 378 aa12.8□□□□□ -0.36
MSH5-204ENST00000375755 IL31Q6EBC2 164 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms