RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 F7P08709 466 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 WARSP23381 471 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 CCT3P49368 545 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 CXCR3P49682 368 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 CDH15P55291 814 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 RHDQ02161 417 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 TARBP2Q15633 366 aaKnown RBP11.45□□□□□ -0.58
PTCH1-203ENST00000375274 EPGNQ6UW88 154 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 FAR1Q8WVX9 515 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 USP7Q93009 1102 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 HMCESQ96FZ2 354 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 SLC38A2Q96QD8 506 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 SLC39A3Q9BRY0 314 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 SPATA5L1Q9BVQ7 753 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 BCO2Q9BYV7 579 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 PLK2Q9NYY3 685 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 COQ6Q9Y2Z9 468 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 MYH6P13533 1939 aa11.45□□□□□ -0.58
PTCH1-203ENST00000375274 H3BSA7 217 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 RFPL1O75677 317 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 OR6B1O95007 311 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 COL6A1P12109 1028 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 IMPDH1P20839 514 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 ITPKAP23677 461 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 RABGGTBP53611 331 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 JAG1P78504 1218 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 CBX3Q13185 183 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 PCLAFQ15004 111 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 PYDC2Q56P42 97 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 CDH24Q86UP0 819 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 CRYBG2Q8N1P7 616 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 MYO19Q96H55 970 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 C12orf42Q96LP6 360 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 FTHL17Q9BXU8 183 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 MINDY3Q9H8M7 445 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 TMEM165Q9HC07 324 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 KCTD5Q9NXV2 234 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 PTGFRNQ9P2B2 879 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 CNOT6Q9ULM6 557 aaKnown RBP11.44□□□□□ -0.58
PTCH1-203ENST00000375274 A8MT66 165 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 RAP2AP10114 183 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 HNF4AP41235 474 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 ATP12AP54707 1039 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 MTPNP58546 118 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 RPL26P61254 145 aaKnown RBP11.44□□□□□ -0.58
PTCH1-203ENST00000375274 CAMKK1Q8N5S9 505 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 FEM1AQ9BSK4 669 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 LRRC3Q9BY71 257 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 RAD18Q9NS91 495 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 ZNF232Q9UNY5 417 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 MED1Q15648 1581 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-203ENST00000375274 SERPINB7O75635 380 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 CCNKO75909 580 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 SIX3O95343 332 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-203ENST00000375274 CLDN9O95484 217 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 AHSGP02765 367 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 MTHFD1P11586 935 aaKnown RBP11.44□□□□□ -0.58
PTCH1-203ENST00000375274 PSMA3P25788 255 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 IVDP26440 423 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 NDST2P52849 883 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 SP2Q02086 613 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 GNA12Q03113 381 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 FAM174BQ3ZCQ3 159 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 KLHL12Q53G59 568 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 ZNF544Q6NX49 715 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 OR7D4Q8NG98 312 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 DENND1AQ8TEH3 1009 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 SLC35F5Q8WV83 523 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 ZFAND2BQ8WV99 257 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 PPCDCQ96CD2 204 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 TEFMQ96QE5 360 aaKnown RBP11.44□□□□□ -0.58
PTCH1-203ENST00000375274 GPR22Q99680 433 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 PSAT1Q9Y617 370 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 SAGE2PA6NJ88 616 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 OGNP20774 298 aaKnown RBP11.44□□□□□ -0.58
PTCH1-203ENST00000375274 TACR2P21452 398 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 RPIAP49247 311 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 RAB15P59190 212 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 ECT2LQ008S8 904 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 CARTPTQ16568 116 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 OGFOD2Q6N063 350 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 PLET1Q6UQ28 207 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 CDHR3Q6ZTQ4 885 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 CAND1Q86VP6 1230 aaKnown RBP11.44□□□□□ -0.58
PTCH1-203ENST00000375274 SVOPLQ8N434 492 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 PQLC3Q8N755 202 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 PIH1D2Q8WWB5 315 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 SLC13A3Q8WWT9 602 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 GPATCH1Q9BRR8 931 aaKnown RBP11.44□□□□□ -0.58
PTCH1-203ENST00000375274 AARSD1Q9BTE6 412 aaKnown RBP11.44□□□□□ -0.58
PTCH1-203ENST00000375274 DNAJC11Q9NVH1 559 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 STYXL1Q9Y6J8 313 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 TLL2Q9Y6L7 1015 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 PTPRJQ12913 1337 aa11.44□□□□□ -0.58
PTCH1-203ENST00000375274 E7ESA3 106 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 PLK4O00444 970 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 GABRDO14764 452 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 NDUFS2O75306 463 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 HERVK_113P63132 956 aa11.43□□□□□ -0.58
PTCH1-203ENST00000375274 TRIM32Q13049 653 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms