RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ZNF7P17097 686 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-202ENST00000374426 AMD1P17707 334 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 PBX1P40424 430 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 CAPZBP47756 277 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 IFI35P80217 286 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-202ENST00000374426 PPIDQ08752 370 aaKnown RBP13.57□□□□□ -0.24
CXCL12-202ENST00000374426 ERV3-1Q14264 604 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 NFKBIBQ15653 356 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 SEPT7Q16181 437 aaKnown RBP13.57□□□□□ -0.24
CXCL12-202ENST00000374426 KHDC1Q4VXA5 237 aaKnown RBP13.57□□□□□ -0.24
CXCL12-202ENST00000374426 TCTN3Q6NUS6 607 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 TMC3Q7Z5M5 1100 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 TMEM135Q86UB9 458 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 MAP7D3Q8IWC1 876 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 TRIM48Q8IWZ4 208 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 TRAM1L1Q8N609 369 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 RSC1A1Q92681 617 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 ELMO2Q96JJ3 720 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 SLC40A1Q9NP59 571 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 NENFQ9UMX5 172 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 DNAJC16Q9Y2G8 782 aa13.57□□□□□ -0.24
CXCL12-202ENST00000374426 GOLGA6L3A6NEY3 463 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 OR52A4PA6NMU1 304 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 PDZK1P1A8MUH7 402 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 GOLGA6L22H0YM25 854 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 MKRN2OSH3BPM6 223 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 KMOO15229 486 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 MTSS1O43312 755 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 KATNA1O75449 491 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 RASSF9O75901 435 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 SLC4A1P02730 911 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 KRT7P08729 469 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 FGF5P12034 268 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 RPL10P27635 214 aaKnown RBP13.56□□□□□ -0.24
CXCL12-202ENST00000374426 CD97P48960 835 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 GPR18Q14330 331 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 IQCB1Q15051 598 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 PDPK2PQ6A1A2 396 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 ABRAXAS1Q6UWZ7 409 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 PRSS42Q7Z5A4 293 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 LRRTM4Q86VH4 590 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 RASGRP3Q8IV61 690 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 FAM26EQ8N5C1 309 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 PLD5Q8N7P1 536 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 KLHL6Q8WZ60 621 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 RAPGEF5Q92565 580 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 STAMBPL1Q96FJ0 436 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 IMP4Q96G21 291 aaKnown RBP13.56□□□□□ -0.24
CXCL12-202ENST00000374426 RNF157Q96PX1 679 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 PSMG3-AS1Q96PY0 264 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 TIMM29Q9BSF4 260 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 CEP41Q9BYV8 373 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 MAGEE1Q9HCI5 957 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 POT1Q9NUX5 634 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 CTTNBP2NLQ9P2B4 639 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 LNPEPQ9UIQ6 1025 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 TMPRSS11EQ9UL52 423 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 POLHQ9Y253 713 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 ZNF711Q9Y462 761 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 ZNF106Q9H2Y7 1883 aaKnown RBP13.56□□□□□ -0.24
CXCL12-202ENST00000374426 MYO9AB2RTY4 2548 aa13.56□□□□□ -0.24
CXCL12-202ENST00000374426 VEGFDO43915 354 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 SPAG6O75602 509 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 CDK14O94921 469 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 TIAF1O95411 115 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 NTRK1P04629 796 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 BPIP17213 487 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 KDELR1P24390 212 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 DRG2P55039 364 aaKnown RBP13.55□□□□□ -0.24
CXCL12-202ENST00000374426 MLLT10P55197 1068 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 ZBED6P86452 979 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.55□□□□□ -0.24
CXCL12-202ENST00000374426 AGAP9Q5VTM2 703 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 CACHD1Q5VU97 1274 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 WASH2PQ6VEQ5 465 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 FAM92BQ6ZTR7 304 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 ASB18Q6ZVZ8 466 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 C11orf96Q7Z7L8 435 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 TEX19Q8NA77 164 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 CPLX3Q8WVH0 158 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 TADA1Q96BN2 335 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 ZNF830Q96NB3 372 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-202ENST00000374426 GPR63Q9BZJ6 419 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 WASH6PQ9NQA3 447 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 RAD18Q9NS91 495 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 EPHA6Q9UF33 1036 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 KCND3Q9UK17 655 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 TLK1Q9UKI8 766 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 CAPN11Q9UMQ6 739 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 PCDHGA6Q9Y5G7 932 aa13.55□□□□□ -0.24
CXCL12-202ENST00000374426 CDC14CA4D256 554 aa13.54□□□□□ -0.24
CXCL12-202ENST00000374426 AURKAO14965 403 aa13.54□□□□□ -0.24
CXCL12-202ENST00000374426 CREG1O75629 220 aa13.54□□□□□ -0.24
CXCL12-202ENST00000374426 RFPL1O75677 317 aa13.54□□□□□ -0.24
CXCL12-202ENST00000374426 PDGFAP04085 211 aa13.54□□□□□ -0.24
CXCL12-202ENST00000374426 NELFEP18615 380 aaKnown RBP13.54□□□□□ -0.24
CXCL12-202ENST00000374426 IDSP22304 550 aa13.54□□□□□ -0.24
CXCL12-202ENST00000374426 PMS2P54278 862 aa13.54□□□□□ -0.24
CXCL12-202ENST00000374426 PPP1CAP62136 330 aa13.54□□□□□ -0.24
CXCL12-202ENST00000374426 CDK18Q07002 472 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms