RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ORAI3Q9BRQ5 295 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 TDRD1Q9BXT4 1180 aaKnown RBP20.36■□□□□ 0.85
SYNC-201ENST00000373484 C12orf65Q9H3J6 166 aaKnown RBP20.36■□□□□ 0.85
SYNC-201ENST00000373484 TMEM74BQ9NUR3 256 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 PCDHB9Q9Y5E1 797 aa20.36■□□□□ 0.85
SYNC-201ENST00000373484 KLHL2O95198 593 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 PCDH8O95206 1070 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 BPGMP07738 259 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 MAOBP27338 520 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 HOXD12P35452 270 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 MAGEA3P43357 314 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 ELP6Q0PNE2 266 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 SLC14A2Q15849 920 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 ARMC12Q5T9G4 340 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 KIAA1161Q6NSJ0 714 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 PID1Q7Z2X4 250 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 PRPF39Q86UA1 669 aaKnown RBP20.35■□□□□ 0.85
SYNC-201ENST00000373484 NUDCD3Q8IVD9 361 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 PAF1Q8N7H5 531 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 NCSTNQ92542 709 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 JADE3Q92613 823 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 TADA1Q96BN2 335 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 GBP5Q96PP8 586 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 PCDH12Q9NPG4 1184 aa20.35■□□□□ 0.85
SYNC-201ENST00000373484 ZC3H7BQ9UGR2 993 aaKnown RBP20.35■□□□□ 0.85
SYNC-201ENST00000373484 EIF2B4Q9UI10 523 aaKnown RBP20.35■□□□□ 0.85
SYNC-201ENST00000373484 ZFR2Q9UPR6 939 aaKnown RBP20.35■□□□□ 0.85
SYNC-201ENST00000373484 A0A1W2PQU0 124 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 FAM159BA6NKW6 160 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 NFKB1P19838 968 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 CD27P26842 260 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 TMEM259Q4ZIN3 620 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 PLA2G2CQ5R387 149 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 RIPOR1Q6ZS17 1223 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 ALYREFQ86V81 257 aaKnown RBP20.34■□□□□ 0.85
SYNC-201ENST00000373484 HORMAD1Q86X24 394 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 TREML1Q86YW5 311 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 C1orf216Q8TAB5 229 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 FEM1CQ96JP0 617 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 ECSITQ9BQ95 431 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 SOX13Q9UN79 622 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 LAMA1P25391 3075 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 A0A1W2PPC4 97 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 NEMP1O14524 444 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 GFRA3O60609 400 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 LRP3O75074 770 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 LYNP07948 512 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 MMP12P39900 470 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 RPS21P63220 83 aaKnown RBP20.34■□□□□ 0.85
SYNC-201ENST00000373484 ERAP2Q6P179 960 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 PPM1NQ8N819 430 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 SPATA22Q8NHS9 363 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 PIH1D2Q8WWB5 315 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 TRIM4Q9C037 500 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 ETAA1Q9NY74 926 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 ADAMTS9Q9P2N4 1935 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 CACNA1EQ15878 2313 aa20.34■□□□□ 0.85
SYNC-201ENST00000373484 RIF1Q5UIP0 2472 aaKnown RBP20.33■□□□□ 0.85
SYNC-201ENST00000373484 SDR42E2A6NKP2 422 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 STK10O94804 968 aaKnown RBP20.33■□□□□ 0.85
SYNC-201ENST00000373484 ENO1P06733 434 aaKnown RBP20.33■□□□□ 0.85
SYNC-201ENST00000373484 TPSB2P20231 275 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 MAT2AP31153 395 aaKnown RBP20.33■□□□□ 0.85
SYNC-201ENST00000373484 NUDT1P36639 197 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 IRX4P78413 519 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 NAB1Q13506 487 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 TPSAB1Q15661 275 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 ZNF284Q2VY69 593 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 TMEM52BQ4KMG9 183 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 SEL1L3Q68CR1 1132 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 CDHR3Q6ZTQ4 885 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 DTX3LQ8TDB6 740 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 DTNBP1Q96EV8 351 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 SPATA13Q96N96 652 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 PANX3Q96QZ0 392 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 FCRL5Q96RD9 977 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 RAB6BQ9NRW1 208 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 SLC7A8Q9UHI5 535 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 PPIL1Q9Y3C6 166 aa20.33■□□□□ 0.85
SYNC-201ENST00000373484 FAM186AA6NE01 2351 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 EP300Q09472 2414 aaPredicted RBP20.32■□□□□ 0.84
SYNC-201ENST00000373484 CCNT2O60583 730 aaKnown RBP20.32■□□□□ 0.84
SYNC-201ENST00000373484 MT-CYBP00156 380 aaPredicted RBP20.32■□□□□ 0.84
SYNC-201ENST00000373484 PRLP01236 227 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 PRKCGP05129 697 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 SPEM2Q0P670 501 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 STX3Q13277 289 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 CHI3L2Q15782 390 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 SETMARQ53H47 684 aaPredicted RBP20.32■□□□□ 0.84
SYNC-201ENST00000373484 ACAD11Q709F0 780 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 WDR75Q8IWA0 830 aaKnown RBP20.32■□□□□ 0.84
SYNC-201ENST00000373484 KBTBD2Q8IY47 623 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 DCLK2Q8N568 766 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 GSDMBQ8TAX9 411 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 MIR1-1HGQ9H1L0 117 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 GBA3Q9H227 469 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 XAB2Q9HCS7 855 aaKnown RBP20.32■□□□□ 0.84
SYNC-201ENST00000373484 ARMCX1Q9P291 453 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 SUSD2Q9UGT4 822 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 SLCO1B1Q9Y6L6 691 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms