RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 PABPC1LQ4VXU2 614 aaKnown RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 AARS2Q5JTZ9 985 aaKnown RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 CCSAPQ6IQ19 270 aaPredicted RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 TRIM74Q86UV6 250 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 SLC44A2Q8IWA5 706 aaPredicted RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 FAR2Q96K12 515 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ATP13A3Q9H7F0 1226 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 SPAG4Q9NPE6 437 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 GLYATL1P3A0A0U1RQE8 302 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 KLHL33A6NCF5 533 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 MAGEA13PA6NCF6 341 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 MYO1GB0I1T2 1018 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 TLL1O43897 1013 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 MAP4P27816 1152 aaKnown RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 UFM1P61960 85 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 HERVK_113P63132 956 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ZNF678Q5SXM1 525 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 SLC22A15Q8IZD6 547 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ADGRG2Q8IZP9 1017 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.07□□□□□ -0.32
NCDN-203ENST00000373253 GPR156Q8NFN8 814 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 PKMYT1Q99640 499 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ERVK-6Q9BXR3 956 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 MMADHCQ9H3L0 296 aaPredicted RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 ELOVL6Q9H5J4 265 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ZNF711Q9Y462 761 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 TRAFD1O14545 582 aaPredicted RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 FGF18O76093 207 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 CD1DP15813 335 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ATP6V1B2P21281 511 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ST8SIA6P61647 398 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 MSLNQ13421 630 aaPredicted RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 ADCK2Q7Z695 626 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 KLHL23Q8NBE8 558 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 TCEAL4Q96EI5 215 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 KCTD14Q9BQ13 255 aaPredicted RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 C1QTNF1Q9BXJ1 281 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ADNPQ9H2P0 1102 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ZBTB26Q9HCK0 441 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 RIC8BQ9NVN3 520 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 DDX18Q9NVP1 670 aaKnown RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 MKS1Q9NXB0 559 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 SLC25A13Q9UJS0 675 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ARID1BQ8NFD5 2236 aaPredicted RBP13.07□□□□□ -0.32
NCDN-203ENST00000373253 IGLV3-25P01717 112 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 HOXC8P31273 242 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 APLP1P51693 650 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 ARF5P84085 180 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 GTF2H3Q13889 308 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 GCNT7Q6ZNI0 430 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 TMEM25Q86YD3 366 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 NKAPQ8N5F7 415 aaKnown RBP13.06□□□□□ -0.32
NCDN-203ENST00000373253 MAGEC3Q8TD91 643 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 ACTRT2Q8TDY3 377 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 CANT1Q8WVQ1 401 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 ELMO1Q92556 727 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 PKP2Q99959 881 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 TDRD1Q9BXT4 1180 aaKnown RBP13.06□□□□□ -0.32
NCDN-203ENST00000373253 ILVBLA1L0T0 632 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 UBFD1O14562 309 aaKnown RBP13.06□□□□□ -0.32
NCDN-203ENST00000373253 RAD51BO15315 384 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 WFS1O76024 890 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 LINGO3P0C6S8 592 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 HNF4AP41235 474 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 SQLEQ14534 574 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 TAF1AQ15573 450 aaPredicted RBP13.06□□□□□ -0.32
NCDN-203ENST00000373253 MANEALQ5VSG8 457 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 PARVBQ9HBI1 364 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 GID8Q9NWU2 228 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 CCL26Q9Y258 94 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 PLK4O00444 970 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 KDELR3O43731 214 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 GLUD1P00367 558 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 HLA-EP13747 358 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 VCLP18206 1134 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 GNAZP19086 355 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 HTR6P50406 440 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 LCP2Q13094 533 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 PDK3Q15120 406 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 METTL21CQ5VZV1 264 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 MAGEE2Q8TD90 523 aaPredicted RBP13.06□□□□□ -0.32
NCDN-203ENST00000373253 SELENOMQ8WWX9 145 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 STN1Q9H668 368 aaKnown RBP13.06□□□□□ -0.32
NCDN-203ENST00000373253 TMEM165Q9HC07 324 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 MRPS23Q9Y3D9 190 aaKnown RBP13.06□□□□□ -0.32
NCDN-203ENST00000373253 PRKAB1Q9Y478 270 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 AP4B1Q9Y6B7 739 aa13.06□□□□□ -0.32
NCDN-203ENST00000373253 LZTS3O60299 673 aaPredicted RBP13.05□□□□□ -0.32
NCDN-203ENST00000373253 IL1BP01584 269 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 SOD2P04179 222 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 LMAN2Q12907 356 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 TEAD2Q15562 447 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 CLEC14AQ86T13 490 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 TRAPPC5Q8IUR0 188 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 JADE3Q92613 823 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 PPP2R3CQ969Q6 453 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 SH3KBP1Q96B97 665 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 COPS8Q99627 209 aa13.05□□□□□ -0.32
NCDN-203ENST00000373253 FAM126AQ9BYI3 521 aaPredicted RBP13.05□□□□□ -0.32
NCDN-203ENST00000373253 ING2Q9H160 280 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms