RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ZNF549Q6P9A3 640 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 SLC16A12Q6ZSM3 486 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 RAB44Q7Z6P3 723 aaPredicted RBP14.68□□□□□ -0.06
COL9A2-202ENST00000372748 TMEM86AQ8N2M4 240 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 FAM86B1Q8N7N1 296 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 ZFP90Q8TF47 636 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 FKBP10Q96AY3 582 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 BAG5Q9UL15 447 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 PCDHB3Q9Y5E6 796 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 B3GAT3O94766 335 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 CCR1P32246 355 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 ZFP36L2P47974 494 aaKnown RBP14.68□□□□□ -0.06
COL9A2-202ENST00000372748 RPS3AP61247 264 aaKnown RBP14.68□□□□□ -0.06
COL9A2-202ENST00000372748 CLCQ05315 142 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 FOXM1Q08050 763 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 TUBA3CQ13748 450 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 SELPLGQ14242 412 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 IHHQ14623 411 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 FAM110CQ1W6H9 321 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 LRRTM3Q86VH5 581 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 C8orf59Q8N0T1 100 aaPredicted RBP14.68□□□□□ -0.06
COL9A2-202ENST00000372748 BPIFB1Q8TDL5 484 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 ITPKCQ96DU7 683 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 TBATAQ96M53 351 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 TSPAN18Q96SJ8 248 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 POLE4Q9NR33 117 aa14.68□□□□□ -0.06
COL9A2-202ENST00000372748 SUPT3HB4E1H0 165 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 PAGE1O75459 146 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 SLC22A3O75751 556 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 WISP3O95389 354 aaPredicted RBP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 UMPSP11172 480 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 NFKBIAP25963 317 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 IL12AP29459 219 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 MTHFRP42898 656 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 CTU2Q2VPK5 515 aaKnown RBP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 TAF2Q6P1X5 1199 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 DTWD1Q8N5C7 304 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 MROQ9BYG7 248 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 AP5M1Q9H0R1 490 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 HPS4Q9NQG7 708 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 PTCH2Q9Y6C5 1203 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 MYADML2A6NDP7 307 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 F8W810 466 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 OXSR1O95747 527 aaPredicted RBP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 PRSS56P0CW18 603 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 GSTM2P28161 218 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 POLR2JP52435 117 aaKnown RBP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 NFKB2Q00653 900 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 YWHAHQ04917 246 aaPredicted RBP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 AAK1Q2M2I8 961 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 AGMOQ6ZNB7 445 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 RBM23Q86U06 439 aaKnown RBP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 SLCO6A1Q86UG4 719 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 CCDC117Q8IWD4 279 aaPredicted RBP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 SLC7A5P1Q8MH63 180 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 SDCCAG3Q96C92 435 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 FCRL2Q96LA5 508 aaPredicted RBP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 HBEGFQ99075 208 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 RRAGCQ9HB90 399 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 KIAA1522Q9P206 1035 aaPredicted RBP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 MTRRQ9UBK8 725 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 A8MU76 341 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 JRKO75564 520 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 GJB3O75712 270 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 PIRTP0C851 137 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 FSHRP23945 695 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 CPT1AP50416 773 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 TIAL1Q01085 375 aaKnown RBP eCLIP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 DSC2Q02487 901 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 ZNF846Q147U1 533 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 MAPK11Q15759 364 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 KDELC1Q6UW63 502 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 DSG4Q86SJ6 1040 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 RIMKLAQ8IXN7 391 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 TMEM199Q8N511 208 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 ITFG1Q8TB96 612 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 PARK7Q99497 189 aaKnown RBP14.67□□□□□ -0.06
COL9A2-202ENST00000372748 VPS51Q9UID3 782 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 UTS2RQ9UKP6 389 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 PDE10AQ9Y233 779 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 GIT1Q9Y2X7 761 aa14.67□□□□□ -0.06
COL9A2-202ENST00000372748 ENPP3O14638 875 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 DEAF1O75398 565 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-202ENST00000372748 E2F6O75461 281 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 PCSK1P29120 753 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 AGTR2P50052 363 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 ZNF33AQ06730 810 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 TRIM32Q13049 653 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 MTA1Q13330 715 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 SKIV2LQ15477 1246 aaKnown RBP14.66□□□□□ -0.06
COL9A2-202ENST00000372748 C6orf141Q5SZD1 244 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 TFAP2DQ7Z6R9 452 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 ZDHHC13Q8IUH4 622 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 ABI1Q8IZP0 508 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 LEMD2Q8NC56 503 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 CHDHQ8NE62 594 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-202ENST00000372748 CASP10Q92851 521 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 AMBRA1Q9C0C7 1298 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 KLHL25Q9H0H3 589 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 CARS2Q9HA77 564 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms