RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SKIV2LQ15477 1246 aaKnown RBP17■□□□□ 0.31
PTP4A1-201ENST00000370651 PKP2Q99959 881 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 A0A088AWK7 358 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 E9PAM4 449 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 TBX1O43435 398 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 C9P02748 559 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 RHOQP17081 205 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 ZNF10P21506 573 aaPredicted RBP17■□□□□ 0.31
PTP4A1-201ENST00000370651 HNF4AP41235 474 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 GLUD2P49448 558 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 CXCR3P49682 368 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 SGCGQ13326 291 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 DAG1Q14118 895 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 KCNJ11Q14654 390 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 MSS51Q4VC12 460 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 KIAA0930Q6ICG6 404 aaPredicted RBP17■□□□□ 0.31
PTP4A1-201ENST00000370651 TCAIMQ8N3R3 496 aa17■□□□□ 0.31
PTP4A1-201ENST00000370651 WRAP73Q9P2S5 460 aaPredicted RBP17■□□□□ 0.31
PTP4A1-201ENST00000370651 CACNA1FO60840 1977 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 STX16-NPEPL1H3BU86 382 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 IRF6O14896 467 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ASPAP45381 313 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 HSPA7P48741 367 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ZDHHC21Q8IVQ6 265 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ZNF557Q8N988 423 aaPredicted RBP16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ZNF516Q92618 1163 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 FAXDC2Q96IV6 333 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 AARSD1Q9BTE6 412 aaKnown RBP16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ST3GAL5Q9UNP4 418 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 SLC27A5Q9Y2P5 690 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 TEX264Q9Y6I9 313 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 NEMP2A6NFY4 417 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 SLC7A4O43246 635 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 NOBOXO60393 691 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 UGT2B17O75795 530 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 CCNYL3P0C7X3 344 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ITPKAP23677 461 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 SLC1A2P43004 574 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 GPD2P43304 727 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ATXN1P54253 815 aaKnown RBP16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 METTL3Q86U44 580 aaKnown RBP16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 HJURPQ8NCD3 748 aaPredicted RBP16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 YTHDF1Q9BYJ9 559 aaKnown RBP16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 PDLIM1O00151 329 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 CLDN9O95484 217 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 EMC10Q5UCC4 262 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 PHTF2Q8N3S3 785 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 MINDY2Q8NBR6 621 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 PIK3R3Q92569 461 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ERLEC1Q96DZ1 483 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 NFKBIZQ9BYH8 718 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 DNAJC11Q9NVH1 559 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 KCTD5Q9NXV2 234 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 A0A1W2PQH9 124 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ERAL1O75616 437 aaKnown RBP16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 PGLSO95336 258 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ASLP04424 464 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 MTHFD1P11586 935 aaKnown RBP16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 CCR4P51679 360 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 ATN1P54259 1190 aaPredicted RBP16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 MTPNP58546 118 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 CERS6Q6ZMG9 384 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 FAM92BQ6ZTR7 304 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 FAM220AQ7Z4H9 259 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 CFAP52Q8N1V2 620 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 SLC9A7Q96T83 725 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 FAM105AQ9NUU6 356 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 SNX7Q9UNH6 387 aa16.99■□□□□ 0.31
PTP4A1-201ENST00000370651 FADS2P1A8MWK0 482 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 ADAMDEC1O15204 470 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 KHDRBS3O75525 346 aaKnown RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 DDNO94850 711 aaPredicted RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 YBEYP58557 167 aaPredicted RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 DEFB128Q7Z7B8 93 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 C11orf65Q8NCR3 313 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 IRGQQ8WZA9 623 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 TOP1MTQ969P6 601 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 NSMCE3Q96MG7 304 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 HNRNPABQ99729 332 aaKnown RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 LRRC3Q9BY71 257 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 DPEP3Q9H4B8 488 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 MCUBQ9NWR8 336 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 HDCP19113 662 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 ASMTP46597 345 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 ARMCX6Q7L4S7 300 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 DSG4Q86SJ6 1040 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 POMGNT2Q8NAT1 580 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 OR52J3Q8NH60 311 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 ZNF384Q8TF68 577 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 SLC13A3Q8WWT9 602 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 MYO19Q96H55 970 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 EIF2B4Q9UI10 523 aaKnown RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 NR2E3Q9Y5X4 410 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 COL1A2P08123 1366 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 CYP4F8P98187 520 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 GNA12Q03113 381 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 KLF1Q13351 362 aaPredicted RBP16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 GTF2H2Q13888 395 aa16.98■□□□□ 0.31
PTP4A1-201ENST00000370651 GTF2H2CQ6P1K8 395 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms