RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 LRTM1Q9HBL6 345 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 POLR3BQ9NW08 1133 aaPredicted RBP8.49□□□□□ -1.05
ABCA4-201ENST00000370225 HCN3Q9P1Z3 774 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 IL36AQ9UHA7 158 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 ZNF536O15090 1300 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 A0A0J9YYE9 177 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 PRMT5O14744 637 aaPredicted RBP8.49□□□□□ -1.05
ABCA4-201ENST00000370225 PSMG1O95456 288 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 TOP3AQ13472 1001 aaPredicted RBP8.49□□□□□ -1.05
ABCA4-201ENST00000370225 GTF2H2Q13888 395 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 ATP13A5Q4VNC0 1218 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 GTF2H2CQ6P1K8 395 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 SH3RF1Q7Z6J0 888 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 OAFQ86UD1 273 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 PPM1MQ96MI6 270 aa8.49□□□□□ -1.05
ABCA4-201ENST00000370225 WDR55Q9H6Y2 383 aaPredicted RBP8.49□□□□□ -1.05
ABCA4-201ENST00000370225 SPATA31D1Q6ZQQ2 1576 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 PKMP14618 531 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 AHCYP23526 432 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 PRKCIP41743 596 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 SMIM11AP58511 58 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 LGALS3BPQ08380 585 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 OLFML2AQ68BL7 652 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 BBS12Q6ZW61 710 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 CHERPQ8IWX8 916 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 OR5M3Q8NGP4 307 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 GBA3Q9H227 469 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 CA12O43570 354 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 SLC35G6P0C7Q6 338 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 NMBRP28336 390 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 AVPR1BP47901 424 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 OC90Q02509 493 aaPredicted RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 POTEHQ6S545 545 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 SMARCD3Q6STE5 483 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 STRADAQ7RTN6 431 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ATCAYQ86WG3 371 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 AZIN2Q96A70 460 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 INPP4AQ96PE3 977 aaPredicted RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ACBD6Q9BR61 282 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ABI3Q9P2A4 366 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 STXBP5LQ9Y2K9 1186 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 A0A1B0GVM2 712 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 TCAF2A6NFQ2 919 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 FOXO6A8MYZ6 492 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 NRP1O14786 923 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 DDX3YO15523 660 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 RHOQP17081 205 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 MLLT3P42568 568 aaPredicted RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 MTX3Q5HYI7 312 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 CLDN9O95484 217 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 IFNGP01579 166 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 DBIP07108 87 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ANXA4P09525 319 aaPredicted RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ARL2P36404 184 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 GABRB2P47870 512 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 PPP2R2BQ00005 443 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 PCBP2Q15366 365 aaKnown RBP eCLIP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ARMC3Q5W041 872 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 LHX5Q9H2C1 402 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 C12orf65Q9H3J6 166 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 IPPKQ9H8X2 491 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ERVK-5Q9HDB9 667 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 FKBPLQ9UIM3 349 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 AP3M1Q9Y2T2 418 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 NDST3O95803 873 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ARCN1P48444 511 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 EIF2B2P49770 351 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 PLGLB1Q02325 96 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 COL9A2Q14055 689 aaPredicted RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 MED27Q6P2C8 311 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 PEX5LQ8IYB4 626 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ULK2Q8IYT8 1036 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ZNF433Q8N7K0 673 aaPredicted RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 RP9Q8TA86 221 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 PTCD2Q8WV60 388 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 MYDGFQ969H8 173 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ESAMQ96AP7 390 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 PLD4Q96BZ4 506 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 TSPAN18Q96SJ8 248 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 LRRC19Q9H756 370 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 CARS2Q9HA77 564 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 MRPS30Q9NP92 439 aaKnown RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 GKN1Q9NS71 199 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 PHF11Q9UIL8 331 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 C5orf60A6NFR6 353 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 LRIG2O94898 1065 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 PLGP00747 810 aaPredicted RBP8.48□□□□□ -1.05
ABCA4-201ENST00000370225 AIF1P55008 147 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 ITGADQ13349 1161 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 SNX20Q7Z614 316 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 SLC4A11Q8NBS3 891 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 FAM81AQ8TBF8 368 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 STYXQ8WUJ0 223 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 CKAP2Q8WWK9 683 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 NUS1Q96E22 293 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 RNF121Q9H920 327 aa8.48□□□□□ -1.05
ABCA4-201ENST00000370225 STX16-NPEPL1H3BU86 382 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 STX16O14662 325 aa8.47□□□□□ -1.05
ABCA4-201ENST00000370225 PRODHO43272 600 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms