RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 MRPL57Q9BQC6 102 aaKnown RBP23.62■■□□□ 1.37
SNX3-203ENST00000368979 DHRS7Q9Y394 339 aa23.62■■□□□ 1.37
SNX3-203ENST00000368979 ATG2BQ96BY7 2078 aa23.61■■□□□ 1.37
SNX3-203ENST00000368979 PLRG1O43660 514 aaKnown RBP23.61■■□□□ 1.37
SNX3-203ENST00000368979 KCNA4P22459 653 aa23.61■■□□□ 1.37
SNX3-203ENST00000368979 TTC31Q49AM3 519 aaPredicted RBP23.61■■□□□ 1.37
SNX3-203ENST00000368979 ZYG11AQ6WRX3 759 aa23.61■■□□□ 1.37
SNX3-203ENST00000368979 C10orf107Q8IVU9 208 aa23.61■■□□□ 1.37
SNX3-203ENST00000368979 PELI3Q8N2H9 469 aa23.61■■□□□ 1.37
SNX3-203ENST00000368979 NKAPQ8N5F7 415 aaKnown RBP23.61■■□□□ 1.37
SNX3-203ENST00000368979 SIPA1Q96FS4 1042 aa23.61■■□□□ 1.37
SNX3-203ENST00000368979 MRGPRX1Q96LB2 322 aa23.61■■□□□ 1.37
SNX3-203ENST00000368979 DERL2Q9GZP9 239 aa23.61■■□□□ 1.37
SNX3-203ENST00000368979 CPSF2Q9P2I0 782 aaKnown RBP23.61■■□□□ 1.37
SNX3-203ENST00000368979 RBP1P09455 135 aa23.6■■□□□ 1.37
SNX3-203ENST00000368979 FGF3P11487 239 aaPredicted RBP23.6■■□□□ 1.37
SNX3-203ENST00000368979 NEFHP12036 1026 aa23.6■■□□□ 1.37
SNX3-203ENST00000368979 AGERQ15109 404 aa23.6■■□□□ 1.37
SNX3-203ENST00000368979 CRY1Q16526 586 aa23.6■■□□□ 1.37
SNX3-203ENST00000368979 KHDC1Q4VXA5 237 aaKnown RBP23.6■■□□□ 1.37
SNX3-203ENST00000368979 LDLRAP1Q5SW96 308 aa23.6■■□□□ 1.37
SNX3-203ENST00000368979 Q6ZS52 159 aa23.6■■□□□ 1.37
SNX3-203ENST00000368979 FGFR1OP2Q9NVK5 253 aa23.6■■□□□ 1.37
SNX3-203ENST00000368979 KCTD5Q9NXV2 234 aa23.6■■□□□ 1.37
SNX3-203ENST00000368979 FZD4Q9ULV1 537 aa23.6■■□□□ 1.37
SNX3-203ENST00000368979 CFAP99D6REC4 459 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 TM7SF2O76062 418 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 PCDH8O95206 1070 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 SLC25A14O95258 325 aaPredicted RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 TSPAN12O95859 305 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 MYL2P10916 166 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 ATP1B2P14415 290 aaPredicted RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 NDUFV2P19404 249 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 TFEBP19484 476 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 AKT1P31749 480 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 CHI3L2Q15782 390 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 USP30Q70CQ3 517 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 ISCA2Q86U28 154 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 GANCQ8TET4 914 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 DCUN1D1Q96GG9 259 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 FAM107BQ9H098 131 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 SARS2Q9NP81 518 aaKnown RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 SLCO1B3Q9NPD5 702 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 LATS2Q9NRM7 1088 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 WNT16Q9UBV4 365 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 CNOT6Q9ULM6 557 aaKnown RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 IGLON5A6NGN9 336 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 C19orf67A6NJJ6 358 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 K7ESM1 405 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 ZBTB14O43829 449 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 EDF1O60869 148 aaKnown RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 MTX2O75431 263 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 OR56A5P0C7T3 313 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 MSH3P20585 1137 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 TARSP26639 723 aaKnown RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 ADPRHP54922 357 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 CES4AQ5XG92 561 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 RAET1GQ6H3X3 334 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 FAM47EQ6ZV65 393 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 CPLX4Q7Z7G2 160 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 KBTBD6Q86V97 674 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 PHYKPLQ8IUZ5 450 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 CPNE9Q8IYJ1 553 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 SYNPOQ8N3V7 929 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 ZNF473Q8WTR7 871 aaKnown RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 INPP5DQ92835 1189 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 PTERQ96BW5 349 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 PANX3Q96QZ0 392 aa23.59■■□□□ 1.37
SNX3-203ENST00000368979 NSRP1Q9H0G5 558 aaKnown RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 TFB2MQ9H5Q4 396 aaKnown RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 MBD1Q9UIS9 605 aaPredicted RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 ZFR2Q9UPR6 939 aaKnown RBP23.59■■□□□ 1.37
SNX3-203ENST00000368979 TCRBV21S2A2A0A5A6 115 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 KRBA1A5PL33 1030 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 CHURC1-FNTBB4DL54 471 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 NDUFAB1O14561 156 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 AP2A2O94973 939 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 TRIM16O95361 564 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 RALBP11234 206 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 ITGB6P18564 788 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 GPR1P46091 355 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 ATP6V0D1P61421 351 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 ATG16L1Q676U5 607 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 SEL1L3Q68CR1 1132 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 KIAA1161Q6NSJ0 714 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 OR6Y1Q8NGX8 325 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 OR14C36Q8NHC7 312 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 SPATS2LQ9NUQ6 558 aaKnown RBP23.58■■□□□ 1.36
SNX3-203ENST00000368979 OXSMQ9NWU1 459 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 KLHL42Q9P2K6 505 aa23.58■■□□□ 1.36
SNX3-203ENST00000368979 INPP4BO15327 924 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 SGTAO43765 313 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 GABRG2P18507 467 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 STARD6P59095 220 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 IL2P60568 153 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 BST1Q10588 318 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 LRRC32Q14392 662 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 ZCCHC23Q6ZST2 131 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 ZBTB2Q8N680 514 aa23.57■■□□□ 1.36
SNX3-203ENST00000368979 RHEBL1Q8TAI7 183 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms