RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 RNF113BQ8IZP6 322 aaKnown RBP3.69□□□□□ -1.82
PTPRK-202ENST00000368205 CCDC112Q8NEF3 446 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 ZNF397Q8NF99 534 aaPredicted RBP3.69□□□□□ -1.82
PTPRK-202ENST00000368205 CNOT9Q92600 299 aaKnown RBP3.69□□□□□ -1.82
PTPRK-202ENST00000368205 GTF3C6Q969F1 213 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 ZC3HAV1LQ96H79 300 aaKnown RBP3.69□□□□□ -1.82
PTPRK-202ENST00000368205 C16orf45Q96MC5 204 aaPredicted RBP3.69□□□□□ -1.82
PTPRK-202ENST00000368205 NEK1Q96PY6 1258 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 CLSTN3Q9BQT9 956 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 LLPHQ9BRT6 129 aaKnown RBP3.69□□□□□ -1.82
PTPRK-202ENST00000368205 CRB3Q9BUF7 120 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 BOLA2Q9H3K6 86 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 GOLPH3LQ9H4A5 285 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 ZSCAN16Q9H4T2 348 aaPredicted RBP3.69□□□□□ -1.82
PTPRK-202ENST00000368205 BICC1Q9H694 974 aaKnown RBP3.69□□□□□ -1.82
PTPRK-202ENST00000368205 ESRP2Q9H6T0 727 aaKnown RBP3.69□□□□□ -1.82
PTPRK-202ENST00000368205 HMG20BQ9P0W2 317 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 DBF4Q9UBU7 674 aaPredicted RBP3.69□□□□□ -1.82
PTPRK-202ENST00000368205 CLIP2Q9UDT6 1046 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 PADI1Q9ULC6 663 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 SUFUQ9UMX1 484 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 GDAQ9Y2T3 454 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 USP16Q9Y5T5 823 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 ANKARQ7Z5J8 1434 aa3.69□□□□□ -1.82
PTPRK-202ENST00000368205 MRC1P22897 1456 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 ARHGAP23Q9P227 1491 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 A0A087WWV3 80 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 ABHD14A-ACY1A0A1B0GW23 586 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 CCDC69A6NI79 296 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 STX16-NPEPL1H3BU86 382 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 STX16O14662 325 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 SKILP12757 684 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 AZU1P20160 251 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 AARSP49588 968 aaKnown RBP eCLIP3.68□□□□□ -1.82
PTPRK-202ENST00000368205 CLDN2P57739 230 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 TEFQ10587 303 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 GAGE5Q13069 117 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 GAGE6Q13070 117 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 ITGADQ13349 1161 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 KRT32Q14532 448 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 PTPN14Q15678 1187 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 STX1AQ16623 288 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 MMEL1Q495T6 779 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 ATL3Q6DD88 541 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 ZNF530Q6P9A1 599 aaPredicted RBP3.68□□□□□ -1.82
PTPRK-202ENST00000368205 STOX1Q6ZVD7 989 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 MOB3CQ70IA8 216 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 CCAR2Q8N163 923 aaKnown RBP3.68□□□□□ -1.82
PTPRK-202ENST00000368205 ERO1AQ96HE7 468 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 USP28Q96RU2 1077 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 SEC62Q99442 399 aaKnown RBP3.68□□□□□ -1.82
PTPRK-202ENST00000368205 EGFL8Q99944 293 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 MXRA8Q9BRK3 442 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 DCTN5Q9BTE1 182 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 FSD1Q9BTV5 496 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 AGXT2Q9BYV1 514 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 ANO10Q9NW15 660 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 CFAP45Q9UL16 551 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 ZNF215Q9UL58 517 aaPredicted RBP3.68□□□□□ -1.82
PTPRK-202ENST00000368205 CARD8Q9Y2G2 431 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 KCNK7Q9Y2U2 307 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 NFAT5O94916 1531 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 ZNF609O15014 1411 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 ADAMTS7Q9UKP4 1686 aa3.68□□□□□ -1.82
PTPRK-202ENST00000368205 TMEM94Q12767 1356 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 SLIT1O75093 1534 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 PABPN1LA6NDY0 278 aaKnown RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 FAM90A7PA6NKC0 464 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 FAM90A22PA8MWA6 464 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 FAM90A12PA8MX19 464 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 FAM90A23PA8MXZ1 464 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 GOLGA6L19H0YKK7 550 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 H3BQV1 296 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 KIF2AO00139 706 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 SLU7O95391 586 aaKnown RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 FDPSP14324 419 aaKnown RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 SLC2A4P14672 509 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 H2AFXP16104 143 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 ZNF10P21506 573 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 RRM1P23921 792 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 SERPINB3P29508 390 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 ADD2P35612 726 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 GNL1P36915 607 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 MMP14P50281 582 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 LUMP51884 338 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 DRG2P55039 364 aaKnown RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 LMO4P61968 165 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 CEBPZQ03701 1054 aaKnown RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 TBL3Q12788 808 aaKnown RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 TFCP2Q12800 502 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 GCKRQ14397 625 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 MCMDC2Q4G0Z9 681 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 STXBP5Q5T5C0 1151 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 TAF3Q5VWG9 929 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 CCSAPQ6IQ19 270 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 RGMBQ6NW40 437 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 ANKRD54Q6NXT1 300 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 ARMCX5Q6P1M9 558 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 TAOK1Q7L7X3 1001 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms