RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SIK3Q9Y2K2 1263 aa14.38□□□□□ -0.11
VAMP4-202ENST00000367740 MAP1AP78559 2803 aaPredicted RBP14.38□□□□□ -0.11
VAMP4-202ENST00000367740 MEN1O00255 615 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 SMC2O95347 1197 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 NADKO95544 446 aaPredicted RBP14.37□□□□□ -0.11
VAMP4-202ENST00000367740 KLK3P07288 261 aaPredicted RBP14.37□□□□□ -0.11
VAMP4-202ENST00000367740 CAPN3P20807 821 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 SSTR2P30874 369 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 STX17P56962 302 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 GSDMDP57764 484 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 BPIFB4P59827 614 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 PTSQ03393 145 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 SLC10A7Q0GE19 358 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 PRAMEF17Q5VTA0 474 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 DUS1LQ6P1R4 473 aaKnown RBP14.37□□□□□ -0.11
VAMP4-202ENST00000367740 MRGPREQ86SM8 312 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 PARP9Q8IXQ6 854 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 GALNT16Q8N428 558 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 AOPEPQ8N6M6 819 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 TM9SF4Q92544 642 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 SLX1AQ9BQ83 275 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 WDR77Q9BQA1 342 aaPredicted RBP14.37□□□□□ -0.11
VAMP4-202ENST00000367740 KLC4Q9NSK0 619 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 POT1Q9NUX5 634 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 FZD10Q9ULW2 581 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 PPIL1Q9Y3C6 166 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 ADGRG1Q9Y653 693 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 CCDC88CQ9P219 2028 aa14.37□□□□□ -0.11
VAMP4-202ENST00000367740 GRID2O43424 1007 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 IPO13O94829 963 aaKnown RBP14.36□□□□□ -0.11
VAMP4-202ENST00000367740 PGLSO95336 258 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 RFC1P35251 1148 aaPredicted RBP14.36□□□□□ -0.11
VAMP4-202ENST00000367740 RORAP35398 523 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 RENBPP51606 427 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 TPI1P60174 286 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 TUBB4BP68371 445 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 KRT85P78386 507 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 IL10RBQ08334 325 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 TUBB2AQ13885 445 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 LBRQ14739 615 aaKnown RBP14.36□□□□□ -0.11
VAMP4-202ENST00000367740 GPR19Q15760 415 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 VWA2Q5GFL6 755 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 SPOCD1Q6ZMY3 1216 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 NOP9Q86U38 636 aaKnown RBP14.36□□□□□ -0.11
VAMP4-202ENST00000367740 RAB43Q86YS6 212 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 PGBD5Q8N414 524 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 ZNF501Q96CX3 271 aaPredicted RBP14.36□□□□□ -0.11
VAMP4-202ENST00000367740 PCMTD1Q96MG8 357 aaPredicted RBP14.36□□□□□ -0.11
VAMP4-202ENST00000367740 NUDCD1Q96RS6 583 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 MAP3K3Q99759 626 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 TUBB2BQ9BVA1 445 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 KRTAP3-3Q9BYR6 98 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 KRTAP3-2Q9BYR7 98 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 NOD2Q9HC29 1040 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 SLC40A1Q9NP59 571 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 DOCK10Q96BY6 2186 aa14.36□□□□□ -0.11
VAMP4-202ENST00000367740 A0A1W2PQJ5 194 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 BICDL2A1A5D9 508 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 GTPBP10A4D1E9 387 aaKnown RBP14.35□□□□□ -0.11
VAMP4-202ENST00000367740 FADS2P1A8MWK0 482 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 DFFAO00273 331 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 NUAK1O60285 661 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 MMEP08473 750 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 BRAFP15056 766 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 CD1EP15812 388 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 MMP8P22894 467 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 OTX2P32243 289 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 PPP1R2P41236 205 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 TSFMP43897 325 aaKnown RBP14.35□□□□□ -0.11
VAMP4-202ENST00000367740 STC1P52823 247 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 NCF4Q15080 339 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 SEPT7Q16181 437 aaKnown RBP14.35□□□□□ -0.11
VAMP4-202ENST00000367740 DCAF10Q5QP82 559 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 SCYL2Q6P3W7 929 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 MRGPRGQ86SM5 289 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 KMT5CQ86Y97 462 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 FMR1NBQ8N0W7 255 aaPredicted RBP14.35□□□□□ -0.11
VAMP4-202ENST00000367740 D2HGDHQ8N465 521 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 ZNF808Q8N4W9 903 aaPredicted RBP14.35□□□□□ -0.11
VAMP4-202ENST00000367740 NPWQ8N729 165 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 CLEC1AQ8NC01 280 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 PIH1D2Q8WWB5 315 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 CCDC120Q96HB5 630 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 WDR24Q96S15 920 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 CARD9Q9H257 536 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 KCND1Q9NSA2 647 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 CACNA1CQ13936 2221 aa14.35□□□□□ -0.11
VAMP4-202ENST00000367740 OR52A4PA6NMU1 304 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 MASP2O00187 686 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 KCNN4O15554 427 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 CCP110O43303 1012 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 PDHA1P08559 390 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 ZNF30P17039 623 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 ZNF8P17098 575 aaPredicted RBP14.34□□□□□ -0.11
VAMP4-202ENST00000367740 GPD1P21695 349 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 HTR7P34969 479 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 EMP3P54852 163 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 ABRQ12979 859 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 HIF1AQ16665 826 aa14.34□□□□□ -0.11
VAMP4-202ENST00000367740 PLA2G4EQ3MJ16 856 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms