RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 PRKD3O94806 890 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 PIGNO95427 931 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 MYL12AP19105 171 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 PTPN7P35236 360 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 IFNGR2P38484 337 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 HNMTP50135 292 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CHN2P52757 468 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CTBP2P56545 445 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CARD18P57730 90 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 HNRNPKP61978 463 aaKnown RBP eCLIP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 DYRK1AQ13627 763 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF846Q147U1 533 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 FAM83EQ2M2I3 478 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TMEM26Q6ZUK4 368 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CMTR2Q8IYT2 770 aaKnown RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 DEFB107AQ8IZN7 70 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 KYQ8NBH2 561 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 AGAP3Q96P47 875 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 FAM83CQ9BQN1 747 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 BTBD10Q9BSF8 475 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TGIF2Q9GZN2 237 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 LY9Q9HBG7 655 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TMBIM4Q9HC24 238 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TMLHEQ9NVH6 421 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CFL2Q9Y281 166 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 FAM220BPB1ANY3 271 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 MCIDASD6RGH6 385 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 NDUFS8O00217 210 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 MYL12BO14950 172 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 UBA1P22314 1058 aaKnown RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CCNFP41002 786 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 PGM5Q15124 567 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TSGA10IPQ3SY00 556 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 HSD17B12Q53GQ0 312 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 GDF6Q6KF10 455 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 NAT16Q8N8M0 369 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 OR10H5Q8NGA6 315 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 LMX1AQ8TE12 382 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 HTRA1Q92743 480 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 NKD1Q969G9 470 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CCDC126Q96EE4 140 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 ZDHHC12Q96GR4 267 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 ASB2Q96Q27 587 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 AIF1LQ9BQI0 150 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 ZPBPQ9BS86 351 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 SEMA4AQ9H3S1 761 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 ACTR8Q9H981 624 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TMEM138Q9NPI0 162 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF609O15014 1411 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 DPPA5A6NC42 116 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 BTBD17A6NE02 478 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 PTGES3LE9PB15 166 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 SLC31A1O15431 190 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 SCN2BO60939 215 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TGDSO95455 350 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 GSTM1P09488 218 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 PET100P0DJ07 73 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TYMPP19971 482 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TIE1P35590 1138 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 AQP5P55064 265 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 GRK1Q15835 563 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 ATP6AP1LQ52LC2 224 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 OTUD3Q5T2D3 398 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 MLIPQ5VWP3 458 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CRELD2Q6UXH1 353 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 NT5DC3Q86UY8 548 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 KBTBD8Q8NFY9 601 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 AGAP11Q8TF27 550 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CKAP2Q8WWK9 683 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 SGF29Q96ES7 293 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 SCLYQ96I15 445 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TBC1D10AQ9BXI6 508 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 POLR1EQ9GZS1 481 aaKnown RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 HIPK2Q9H2X6 1198 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 PNPLA8Q9NP80 782 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TBX20Q9UMR3 447 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 L1RE1Q9UN81 338 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 EXOGQ9Y2C4 368 aaKnown RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TIMM13Q9Y5L4 95 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 BOLA2-SMG1P6H3BVE0 249 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 TNFRSF10BO14763 440 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF682O95780 498 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 PLATP00750 562 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 ITGA2BP08514 1039 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 TSPAN19P0C672 248 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 ABOP16442 354 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 RPA1P27694 616 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 GCH1P30793 250 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 BMPR2Q13873 1038 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 PDK2Q15119 407 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 SLC5A9Q2M3M2 681 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 POM121L1PQ3SYA9 428 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 SEL1L3Q68CR1 1132 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 TICAM1Q8IUC6 712 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 OR6Y1Q8NGX8 325 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 MAPK15Q8TD08 544 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 IRGQQ8WZA9 623 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 NSMCE2Q96MF7 247 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 EBNA1BP2Q99848 306 aaKnown RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 DUSP23Q9BVJ7 150 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms