RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 GRAMD4Q6IC98 578 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 TANGO2Q6ICL3 276 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 C22orf39Q6P5X5 142 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 PAQR3Q6TCH7 311 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 USP45Q70EL2 814 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 NET1Q7Z628 596 aaPredicted RBP10.78□□□□□ -0.68
H3F3A-202ENST00000366814 FBXO39Q8N4B4 442 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 PCDH20Q8N6Y1 951 aaKnown RBP10.78□□□□□ -0.68
H3F3A-202ENST00000366814 PTGR2Q8N8N7 351 aaPredicted RBP10.78□□□□□ -0.68
H3F3A-202ENST00000366814 OTUB2Q96DC9 234 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 MOCOSQ96EN8 888 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 ZSWIM3Q96MP5 696 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 THTPAQ9BU02 230 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 BBS2Q9BXC9 721 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 CLPBQ9H078 707 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 TNKS2Q9H2K2 1166 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 NDE1Q9NXR1 346 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 NEDD8-MDP1E9PL57 170 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 H3BMM5 538 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 NRG2O14511 850 aaPredicted RBP10.78□□□□□ -0.68
H3F3A-202ENST00000366814 MOSPD3O75425 235 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 PRAMEF1O95521 474 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 NFKBIAP25963 317 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 RECQLP46063 649 aaPredicted RBP10.78□□□□□ -0.68
H3F3A-202ENST00000366814 XIAPP98170 497 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 TIAL1Q01085 375 aaKnown RBP eCLIP10.78□□□□□ -0.68
H3F3A-202ENST00000366814 CUL3Q13618 768 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 GEN1Q17RS7 908 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 MYLK3Q32MK0 819 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 TRMT5Q32P41 509 aaKnown RBP10.78□□□□□ -0.68
H3F3A-202ENST00000366814 PTRHD1Q6GMV3 140 aaKnown RBP10.78□□□□□ -0.68
H3F3A-202ENST00000366814 TXNDC11Q6PKC3 985 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 SNX20Q7Z614 316 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 PIANPQ8IYJ0 282 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 RBFAQ8N0V3 343 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 CPSF7Q8N684 471 aaKnown RBP10.78□□□□□ -0.68
H3F3A-202ENST00000366814 POU5F2Q8N7G0 328 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 RP9Q8TA86 221 aaKnown RBP10.78□□□□□ -0.68
H3F3A-202ENST00000366814 ACTRT2Q8TDY3 377 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 SMARCD2Q92925 531 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 IRF7Q92985 503 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 ELSPBP1Q96BH3 223 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 FAM136AQ96C01 138 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 FAM122AQ96E09 287 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 BIRC8Q96P09 236 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 SMIM14Q96QK8 99 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 ATOH8Q96SQ7 321 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 RTKNQ9BST9 563 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 PLA2G2FQ9BZM2 168 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 KCNH6Q9H252 994 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 GSTO2Q9H4Y5 243 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 MEAF6Q9HAF1 191 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 SLC2A4RGQ9NR83 387 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 GNPTGQ9UJJ9 305 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 SLC8A2Q9UPR5 921 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 CCL26Q9Y258 94 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 FIS1Q9Y3D6 152 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 TRAF6Q9Y4K3 522 aa10.78□□□□□ -0.68
H3F3A-202ENST00000366814 GLYATL1P3A0A0U1RQE8 302 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 RGSL1A5PLK6 1076 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 MEI4A8MW99 385 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 UBXN8O00124 270 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 BTN3A1O00481 513 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 GIPC1O14908 333 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 SNX2O60749 519 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 PEX11AO75192 247 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 GPC4O75487 556 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 SKAP2O75563 359 aaPredicted RBP10.77□□□□□ -0.69
H3F3A-202ENST00000366814 POP4O95707 220 aaKnown RBP10.77□□□□□ -0.69
H3F3A-202ENST00000366814 PABPC1P11940 636 aaKnown RBP10.77□□□□□ -0.69
H3F3A-202ENST00000366814 RPS3P23396 243 aaKnown RBP eCLIP10.77□□□□□ -0.694e-9■■■■□ 23.1
H3F3A-202ENST00000366814 HLA-FP30511 346 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 HNF1BP35680 557 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 SPAM1P38567 509 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 NNMTP40261 264 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 CDKN1CP49918 316 aaPredicted RBP10.77□□□□□ -0.69
H3F3A-202ENST00000366814 HERC3Q15034 1050 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 E2F5Q15329 346 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 MAPRE2Q15555 327 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 OR4D1Q15615 310 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 CCDC6Q16204 474 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 PFKFB4Q16877 469 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 GPR33Q49SQ1 333 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 ZDHHC20Q5W0Z9 365 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 FAM151BQ6UXP7 276 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 ULK2Q8IYT8 1036 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 CLYBLQ8N0X4 340 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 CBARPQ8N350 705 aaPredicted RBP10.77□□□□□ -0.69
H3F3A-202ENST00000366814 PHTF2Q8N3S3 785 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 MAELQ96JY0 434 aaKnown RBP10.77□□□□□ -0.69
H3F3A-202ENST00000366814 RPL10LQ96L21 214 aaKnown RBP10.77□□□□□ -0.69
H3F3A-202ENST00000366814 ZNF641Q96N77 438 aaPredicted RBP10.77□□□□□ -0.69
H3F3A-202ENST00000366814 ASB16Q96NS5 453 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 PRRX2Q99811 253 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 CPEB1Q9BZB8 566 aaKnown RBP10.77□□□□□ -0.69
H3F3A-202ENST00000366814 SUV39H2Q9H5I1 410 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 ASB8Q9H765 288 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 SPHK2Q9NRA0 654 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 CRLS1Q9UJA2 301 aa10.77□□□□□ -0.69
H3F3A-202ENST00000366814 INTS6Q9UL03 887 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms