RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 XKR5Q6UX68 686 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 CLEC18BQ6UXF7 455 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 RANBP10Q6VN20 620 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 PPP1R21Q6ZMI0 780 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 TTC7BQ86TV6 843 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 TSPAN33Q86UF1 283 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 HOOK3Q86VS8 718 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 DCP2Q8IU60 420 aaKnown RBP8.13□□□□□ -1.11
MRPL55-211ENST00000366738 SLC35F3Q8IY50 421 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 MPP5Q8N3R9 675 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 CLEC18CQ8NCF0 446 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 IFT81Q8WYA0 676 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 ART4Q93070 314 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 RAB7BQ96AH8 199 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 ZNF641Q96N77 438 aaPredicted RBP8.13□□□□□ -1.11
MRPL55-211ENST00000366738 PPP1R2P1Q96PQ5 205 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 PSMG3-AS1Q96PY0 264 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 TRIM56Q9BRZ2 755 aaKnown RBP8.13□□□□□ -1.11
MRPL55-211ENST00000366738 WRAP53Q9BUR4 548 aaKnown RBP8.13□□□□□ -1.11
MRPL55-211ENST00000366738 LRRC61Q9BV99 259 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 BOCQ9BWV1 1114 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 SLC25A18Q9H1K4 315 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 PCDH12Q9NPG4 1184 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 SYBUQ9NX95 663 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 KCNK4Q9NYG8 393 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 WHRNQ9P202 907 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 RABGEF1Q9UJ41 708 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 COQ6Q9Y2Z9 468 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 CSNK1G3Q9Y6M4 447 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 CSMD1Q96PZ7 3565 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 LRP4O75096 1905 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 POLQO75417 2590 aa8.13□□□□□ -1.11
MRPL55-211ENST00000366738 ITPR3Q14573 2671 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 PRRC2CQ9Y520 2896 aaKnown RBP8.12□□□□□ -1.11
MRPL55-211ENST00000366738 A0A0J9YYE9 177 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 CCDC78A2IDD5 438 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 GOLGA6CA6NDK9 693 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 GOLGA6BA6NDN3 693 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 A8MX80 341 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 YY2O15391 372 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 TRBC1P01850 177 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 FGF1P05230 155 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 GOLGA6DP0CG33 693 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 SFTPCP11686 197 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 TSHRP16473 764 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 HLA-DPA1P20036 260 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 CA4P22748 312 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 MGAT1P26572 445 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 MMP12P39900 470 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 MAGEA3P43357 314 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 EPHB1P54762 984 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 DRG2P55039 364 aaKnown RBP8.12□□□□□ -1.11
MRPL55-211ENST00000366738 FOXK1P85037 733 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 DHX9Q08211 1270 aaKnown RBP8.12□□□□□ -1.11
MRPL55-211ENST00000366738 CDH17Q12864 832 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 CALCOCO2Q13137 446 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 SGCGQ13326 291 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 SPIDRQ14159 915 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 POU6F1Q14863 301 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 FASTKD3Q14CZ7 662 aaKnown RBP8.12□□□□□ -1.11
MRPL55-211ENST00000366738 IRF4Q15306 451 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 NR0B2Q15466 257 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 TCEA2Q15560 299 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 UGP2Q16851 508 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 CCDC38Q502W7 563 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 PRRT3Q5FWE3 981 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 HP1BP3Q5SSJ5 553 aaPredicted RBP8.12□□□□□ -1.11
MRPL55-211ENST00000366738 CERCAMQ5T4B2 595 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 DENND2CQ68D51 928 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 CCDC70Q6NSX1 233 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 LRRC8BQ6P9F7 803 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 BRAT1Q6PJG6 821 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 PCGF5Q86SE9 256 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 SFTPA2Q8IWL1 248 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 PHACTR4Q8IZ21 702 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 FBXO39Q8N4B4 442 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 PAF1Q8N7H5 531 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 DNAAF3Q8N9W5 541 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 MCUQ8NE86 351 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 DENND6BQ8NEG7 585 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 FAM174AQ8TBP5 190 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 BLOC1S5Q8TDH9 187 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 SPOCK2Q92563 424 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 UBXN4Q92575 508 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 EID2BQ96D98 161 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 LIN37Q96GY3 246 aaPredicted RBP8.12□□□□□ -1.11
MRPL55-211ENST00000366738 MCCC1Q96RQ3 725 aaPredicted RBP8.12□□□□□ -1.11
MRPL55-211ENST00000366738 CCDC3Q9BQI4 270 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 FOXP3Q9BZS1 431 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 FAM114A2Q9NRY5 505 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 GOLGA6AQ9NYA3 693 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 DKK3Q9UBP4 350 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 B4GALT6Q9UBX8 382 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 PISDQ9UG56 409 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 APOBEC3BQ9UH17 382 aaKnown RBP8.12□□□□□ -1.11
MRPL55-211ENST00000366738 ANAPC5Q9UJX4 755 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 NFU1Q9UMS0 254 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 ZNF711Q9Y462 761 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 PCDHGA7Q9Y5G6 932 aa8.12□□□□□ -1.11
MRPL55-211ENST00000366738 ZNF106Q9H2Y7 1883 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms