RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CGNL1Q0VF96 1302 aa4.17□□□□□ -1.74
RNU6-560P-201ENST00000364007 NOTCH4Q99466 2003 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 IGHV4OR15-8A0A075B7B6 117 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 HMGB1P1B2RPK0 211 aaPredicted RBP4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 TMEM189-UBE2V1I3L0A0 370 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 J3QR06 171 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 TULP2O00295 520 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 CDH1P12830 882 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 GNL1P36915 607 aaPredicted RBP4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 EIF2DP41214 584 aaKnown RBP4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 IFI35P80217 286 aaPredicted RBP4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 TMF1P82094 1093 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 UBE2V1Q13404 147 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 GTF2H2Q13888 395 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 PCLAFQ15004 111 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 IGSF11Q5DX21 431 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 KIAA1161Q6NSJ0 714 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 GTF2H2CQ6P1K8 395 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 UNQ6126/PRO20091Q6UXV3 157 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 ASB18Q6ZVZ8 466 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 SFR1Q86XK3 245 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 THAP6Q8TBB0 222 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 JAKMIP2Q96AA8 810 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 SLC22A18Q96BI1 424 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 IGSF21Q96ID5 467 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 IL17FQ96PD4 163 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 LRMDAQ9H2I8 198 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 SLCO5A1Q9H2Y9 848 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 RAD21L1Q9H4I0 556 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 TRMT1Q9NXH9 659 aaKnown RBP4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 DNAJB4Q9UDY4 337 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 ZNF711Q9Y462 761 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 PCDHGA5Q9Y5G8 931 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 SNX8Q9Y5X2 465 aa4.16□□□□□ -1.74
RNU6-560P-201ENST00000364007 LRRC72A6NJI9 287 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 ACOT8O14734 319 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZBTB43O43298 467 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 ERAL1O75616 437 aaKnown RBP4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 WISP2O76076 250 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 STARD3NLO95772 234 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 AKR1B1P15121 316 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 PRLRP16471 622 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 TRIM21P19474 475 aaKnown RBP4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 NMBRP28336 390 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 MEP1AQ16819 746 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 TMEM35AQ53FP2 167 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 STXBP5Q5T5C0 1151 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 CFAP58Q5T655 872 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 RUSC1-AS1Q66K80 236 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 CAPRIN2Q6IMN6 1127 aaKnown RBP4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 TRNP1Q6NT89 227 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 SPSB3Q6PJ21 355 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 TUBA1AQ71U36 451 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNF534Q76KX8 674 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 KMT5CQ86Y97 462 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 PM20D2Q8IYS1 436 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 SLC5A8Q8N695 610 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 GCSAMQ8N6F7 178 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 DNAAF4Q8WXU2 420 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 MOAP1Q96BY2 351 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 FEM1CQ96JP0 617 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 CEP295NLQ96MC4 621 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 DUX5Q96PT3 197 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 TUBA1CQ9BQE3 449 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 SYT17Q9BSW7 474 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 PPIL3Q9H2H8 161 aaKnown RBP4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 EBF2Q9HAK2 575 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 PLSCR4Q9NRQ2 329 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 TCP11L1Q9NUJ3 509 aa4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 TMEM184BQ9Y519 407 aaPredicted RBP4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.15□□□□□ -1.75
RNU6-560P-201ENST00000364007 SMTNL1A8MU46 457 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 PLK4O00444 970 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNHIT1O43257 154 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 TMCC2O75069 709 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZWINTO95229 277 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 GH2P01242 217 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 SNRNP70P08621 437 aaKnown RBP4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 POLR2CP19387 275 aaPredicted RBP4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 SAT1P21673 171 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 KCNA5P22460 613 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 CCKBRP32239 447 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 RAD52P43351 418 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 AMPHP49418 695 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 HSD17B4P51659 736 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNF132P52740 706 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 PNLIPRP2P54317 469 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 RRP1P56182 461 aaKnown RBP4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 BECN1Q14457 450 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNF234Q14588 700 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 MVPQ14764 893 aaKnown RBP4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 IRAK1BP1Q5VVH5 260 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 OR7E24Q6IFN5 339 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 TPRG1Q6ZUI0 275 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 Q75L30 129 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 GALNT13Q8IUC8 556 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 EPHX4Q8IUS5 362 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 OR52I2Q8NH67 350 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 LNX1Q8TBB1 728 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms