RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 TAS2R42Q7RTR8 314 aa26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 CHERPQ8IWX8 916 aaKnown RBP26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 ANKFN1Q8N957 763 aa26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 FEM1AQ9BSK4 669 aa26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 OSBPL11Q9BXB4 747 aa26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 MAGEE1Q9HCI5 957 aa26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 RIC8BQ9NVN3 520 aa26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 EIF2B4Q9UI10 523 aaKnown RBP26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 FNDC3AQ9Y2H6 1198 aaKnown RBP26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 SLC4A7Q9Y6M7 1214 aa26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 KIAA1671Q9BY89 1806 aa26.1■■□□□ 1.77
CUEDC1-201ENST00000360238 HMGCLP35914 325 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 RPL5P46777 297 aaKnown RBP26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 ERVK-8P63133 956 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 TGFBIQ15582 683 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 PDCD4Q53EL6 469 aaKnown RBP26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 HMBOX1Q6NT76 420 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 CERS6Q6ZMG9 384 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 SCLYQ96I15 445 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 MUC13Q9H3R2 512 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 CCM2LQ9NUG4 571 aaPredicted RBP26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 CMTM6Q9NX76 183 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 LZTS1Q9Y250 596 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 PCDHB9Q9Y5E1 797 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 OR51B4Q9Y5P0 310 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 SLC30A1Q9Y6M5 507 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 TYW5A2RUC4 315 aaKnown RBP26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 CLPTM1O96005 669 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 MBL2P11226 248 aaPredicted RBP26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 AP1S1P61966 158 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 INPP5AQ14642 412 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 ERMP1Q7Z2K6 904 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 TRIM4Q9C037 500 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 ACTR3BQ9P1U1 418 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 GMPR2Q9P2T1 348 aaKnown RBP26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 PCDHGB4Q9UN71 923 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 DHRS7Q9Y394 339 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 PCDHGB5Q9Y5G0 923 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 PCDHA9Q9Y5H5 950 aa26.09■■□□□ 1.77
CUEDC1-201ENST00000360238 C9JVG2 144 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 PRMT5O14744 637 aaPredicted RBP26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 EEDO75530 441 aaKnown RBP26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 SOD2P04179 222 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 BMP2P12643 396 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 PSMC3P17980 439 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 PTPRRQ15256 657 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 NRF1Q16656 503 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 DCAF4L2Q8NA75 395 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 CANT1Q8WVQ1 401 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 MYO19Q96H55 970 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 PLEKHG4BQ96PX9 1271 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 GPR63Q9BZJ6 419 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 SMPD4Q9NXE4 827 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 VPS51Q9UID3 782 aa26.08■■□□□ 1.77
CUEDC1-201ENST00000360238 ZFP36L2P47974 494 aaKnown RBP26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 TXNL4AP83876 142 aaKnown RBP26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 SMAD3P84022 425 aaKnown RBP26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 CAPRIN1Q14444 709 aaKnown RBP26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 ADAMTSL2Q86TH1 951 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 SATL1Q86VE3 508 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 CREBZFQ9NS37 354 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 ZIM2Q9NZV7 527 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 DNMT3BQ9UBC3 853 aaKnown RBP26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 APPL1Q9UKG1 709 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 PADI4Q9UM07 663 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 FCF1Q9Y324 198 aaKnown RBP26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 C7orf72A4D263 438 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 PGM3O95394 542 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 GK3PQ14409 553 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 ARMC12Q5T9G4 340 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 CWF19L1Q69YN2 538 aaKnown RBP26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 LYSMD3Q7Z3D4 306 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 PPWD1Q96BP3 646 aaKnown RBP26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 C19orf43Q9BQ61 176 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 SARS2Q9NP81 518 aaKnown RBP26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 ASB1Q9Y576 335 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 TNPO3Q9Y5L0 923 aaKnown RBP26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 COMMD3-BMI1R4GMX3 469 aa26.07■■□□□ 1.76
CUEDC1-201ENST00000360238 COL4A6Q14031 1691 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 DHRS12A0PJE2 317 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 GFRA2O00451 464 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 SLC22A3O75751 556 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 PGLSO95336 258 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 PCBP2Q15366 365 aaKnown RBP eCLIP26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 OR2T11Q8NH01 316 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 GRIN3AQ8TCU5 1115 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 NAT14Q8WUY8 206 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 TMEM125Q96AQ2 219 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 NOL11Q9H8H0 719 aaKnown RBP26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 HNRNPRO43390 633 aaKnown RBP26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 TIPRLO75663 272 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 OR4F21O95013 312 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 TFAP2AP05549 437 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 RPS3P23396 243 aaKnown RBP eCLIP26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 APOFQ13790 326 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 NFYCQ13952 458 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 ATXN7L2Q5T6C5 722 aaPredicted RBP26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 FRA10AC1Q70Z53 315 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 AMIGO2Q86SJ2 522 aa26.06■■□□□ 1.76
CUEDC1-201ENST00000360238 EID2BQ96D98 161 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms