RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 GRIK2Q13002 908 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 EIF2B5Q13144 721 aaKnown RBP14.69□□□□□ -0.06
CCNE1-202ENST00000357943 ITIH4Q14624 930 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 EFTUD2Q15029 972 aaKnown RBP eCLIP14.69□□□□□ -0.067e-13■■■■■ 47.1
CCNE1-202ENST00000357943 ALG11Q2TAA5 492 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 LYPLAL1Q5VWZ2 237 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 RABEPKQ7Z6M1 372 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 PARGQ86W56 976 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 RASGEF1AQ8N9B8 481 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 C2CD4AQ8NCU7 369 aaPredicted RBP14.69□□□□□ -0.06
CCNE1-202ENST00000357943 CAVIN3Q969G5 261 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 SGF29Q96ES7 293 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 PHOX2BQ99453 314 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 TTC1Q99614 292 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 CYP4F12Q9HCS2 524 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 VPS18Q9P253 973 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 KLQ9UEF7 1012 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 RABGEF1Q9UJ41 708 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 GMEB2Q9UKD1 530 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 SUFUQ9UMX1 484 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 SLC6A14Q9UN76 642 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 CRYL1Q9Y2S2 319 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 PRKAB1Q9Y478 270 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 PSAT1Q9Y617 370 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 PRSS21Q9Y6M0 314 aa14.69□□□□□ -0.06
CCNE1-202ENST00000357943 OR2AG2A6NM03 316 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 SGTAO43765 313 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 VEGFDO43915 354 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 NUAK1O60285 661 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 NDUFS3O75489 264 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 HAUS5O94927 633 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 AHSGP02765 367 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 ATP1B2P14415 290 aaPredicted RBP14.68□□□□□ -0.06
CCNE1-202ENST00000357943 PPARGP37231 505 aaPredicted RBP14.68□□□□□ -0.06
CCNE1-202ENST00000357943 NSG1P42857 185 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 SRP54P61011 504 aaKnown RBP14.68□□□□□ -0.06
CCNE1-202ENST00000357943 IRX4P78413 519 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 SLC29A2Q14542 456 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 UAP1Q16222 522 aaPredicted RBP14.68□□□□□ -0.06
CCNE1-202ENST00000357943 ZNF449Q6P9G9 518 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 FBXO38Q6PIJ6 1188 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 PACS1Q6VY07 963 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 RD3Q7Z3Z2 195 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 MTERF4Q7Z6M4 381 aaKnown RBP14.68□□□□□ -0.06
CCNE1-202ENST00000357943 RBFAQ8N0V3 343 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 UBLCP1Q8WVY7 318 aaPredicted RBP14.68□□□□□ -0.06
CCNE1-202ENST00000357943 LPGAT1Q92604 370 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 CDKL2Q92772 493 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 DCUN1D1Q96GG9 259 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 SCARF2Q96GP6 870 aaPredicted RBP14.68□□□□□ -0.06
CCNE1-202ENST00000357943 TCF12Q99081 682 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 FUT8Q9BYC5 575 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 ZCCHC2Q9C0B9 1178 aaKnown RBP14.68□□□□□ -0.06
CCNE1-202ENST00000357943 TCEAL2Q9H3H9 227 aaPredicted RBP14.68□□□□□ -0.06
CCNE1-202ENST00000357943 INTS10Q9NVR2 710 aaKnown RBP14.68□□□□□ -0.06
CCNE1-202ENST00000357943 DNAJC28Q9NX36 388 aa14.68□□□□□ -0.06
CCNE1-202ENST00000357943 UBA6A0AVT1 1052 aaPredicted RBP14.67□□□□□ -0.06
CCNE1-202ENST00000357943 CFAP99D6REC4 459 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 TNFRSF10CO14798 259 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 CHUKO15111 745 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 RALBP11234 206 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 ZNF7P17097 686 aaPredicted RBP14.67□□□□□ -0.06
CCNE1-202ENST00000357943 ABCG1P45844 678 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 LEPRP48357 1165 aaKnown RBP14.67□□□□□ -0.06
CCNE1-202ENST00000357943 PPARDQ03181 441 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 RNF187Q5TA31 235 aaPredicted RBP14.67□□□□□ -0.06
CCNE1-202ENST00000357943 CNSTQ6PJW8 725 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 TMEM220Q6QAJ8 160 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 KIAA0408Q6ZU52 694 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 TRAPPC5Q8IUR0 188 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 HID1Q8IV36 788 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 ZNF547Q8IVP9 402 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 CTAGE3PQ8IX95 158 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 BEND7Q8N7W2 519 aaPredicted RBP14.67□□□□□ -0.06
CCNE1-202ENST00000357943 PPM1NQ8N819 430 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 GABPB2Q8TAK5 448 aaPredicted RBP14.67□□□□□ -0.06
CCNE1-202ENST00000357943 HEXDCQ8WVB3 486 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 BIRC8Q96P09 236 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 P2RY12Q9H244 342 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 ACSS3Q9H6R3 686 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 CARS2Q9HA77 564 aaKnown RBP14.67□□□□□ -0.06
CCNE1-202ENST00000357943 TM7SF3Q9NS93 570 aa14.67□□□□□ -0.06
CCNE1-202ENST00000357943 A0A087WUV0 522 aaPredicted RBP14.66□□□□□ -0.06
CCNE1-202ENST00000357943 CCDC151A5D8V7 595 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 PRMT5O14744 637 aaPredicted RBP14.66□□□□□ -0.06
CCNE1-202ENST00000357943 KHNYNO15037 678 aaKnown RBP14.66□□□□□ -0.06
CCNE1-202ENST00000357943 CSF2P04141 144 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 ABHD2P08910 425 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 FMO4P31512 558 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 HSD17B3P37058 310 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 GNPDA1P46926 289 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 HK3P52790 923 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 NHLH1Q02575 133 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 SPEM2Q0P670 501 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 GTF2H3Q13889 308 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 BRD3Q15059 726 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 TCEA2Q15560 299 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 MAP9Q49MG5 647 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 PYCR3Q53H96 274 aa14.66□□□□□ -0.06
CCNE1-202ENST00000357943 CRTC3Q6UUV7 619 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms