RNA–Protein interactions for RNA: ENST00000357613.8

TMEM170A-201, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best) BASIC

Gene TMEM170A, Length 4,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-201ENST00000357613 KIR3DL1P43629 444 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 TMEM198Q66K66 360 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 NAIF1Q69YI7 327 aaPredicted RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 FAM129CQ86XR2 697 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 CLDN19Q8N6F1 224 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 ZNF540Q8NDQ6 660 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 HERVK_113Q902F9 699 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 CDK15Q96Q40 435 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 ZNF395Q9H8N7 513 aaPredicted RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 POLR3BQ9NW08 1133 aaPredicted RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 SHANK3Q9BYB0 1731 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 CARNS1A5YM72 827 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 GSC2O15499 205 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 COL6A1P12109 1028 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 CAP1Q01518 475 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 PTP4A2Q12974 167 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 SIM2Q14190 667 aaPredicted RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 DPYSL2Q16555 572 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 ZDHHC24Q6UX98 284 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 OR4A15Q8NGL6 344 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 ADGRE2Q9UHX3 823 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 IKZF3Q9UKT9 509 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 ZNF510Q9Y2H8 683 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 YIPF1Q9Y548 306 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 A0A087WXM4 84 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 CCDC162PA2VCL2 907 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 ARVCFO00192 962 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 POP4O95707 220 aaKnown RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 VIPP01282 170 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 ST13P50502 369 aaKnown RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 PLA2G16P53816 162 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 SRSF11Q05519 484 aaKnown RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 CACNG1Q06432 222 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 PDK3Q15120 406 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 KLHL12Q53G59 568 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 ARMCX4Q5H9R4 360 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 CCNYL2Q5T2Q4 361 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 ZNF57Q68EA5 555 aaPredicted RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 CPSF7Q8N684 471 aaKnown RBP12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 C19orf18Q8NEA5 215 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 ZFP28Q8NHY6 868 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 TEPSINQ96N21 525 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 EBF4Q9BQW3 602 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 MAP4K5Q9Y4K4 846 aa12.14□□□□□ -0.47
TMEM170A-201ENST00000357613 CXorf49A8MYA2 514 aaPredicted RBP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 LYPLAL1Q5VWZ2 237 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 PAOXQ6QHF9 649 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 VITQ6UXI7 678 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 ZCCHC10Q8TBK6 192 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 IPCEF1Q8WWN9 437 aaPredicted RBP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 SLC9A6Q92581 669 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 LMLNQ96KR4 655 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 HEPHQ9BQS7 1158 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 TRMOQ9BU70 441 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 BRINP2Q9C0B6 783 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 C3orf18Q9UK00 162 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 TSC22D4Q9Y3Q8 395 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 SAP18O00422 153 aaKnown RBP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 ERVK-21P61565 698 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 RGS1Q08116 209 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 ILF2Q12905 390 aaKnown RBP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 PPIGQ13427 754 aaKnown RBP eCLIP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 MADCAM1Q13477 382 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 LSM12Q3MHD2 195 aaKnown RBP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 FAAH2Q6GMR7 532 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 CHSY3Q70JA7 882 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 HID1Q8IV36 788 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 SMYD1Q8NB12 490 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 KCT2Q8NC54 265 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 FBXL18Q96ME1 805 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 SERHL2Q9H4I8 314 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 SERHLQ9NQF3 203 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 AKAP7Q9P0M2 348 aaPredicted RBP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 VIRMAQ69YN4 1812 aaKnown RBP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 PRNPP04156 253 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 ANXA4P09525 319 aaPredicted RBP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 IDSP22304 550 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 IL10RBQ08334 325 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 C2orf80Q0P641 193 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 RALGPS1Q5JS13 557 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 TAF8Q7Z7C8 310 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 SLC35B2Q8TB61 432 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 TRAPPC9Q96Q05 1148 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 RPS6KA6Q9UK32 745 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 VPS4AQ9UN37 437 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 CFAP20Q9Y6A4 193 aaKnown RBP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 PAPPAQ13219 1627 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 TOP3BO95985 862 aaKnown RBP12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 HTRA3P83110 453 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 TNK2Q07912 1038 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 TRIM32Q13049 653 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 PTPRCAPQ14761 206 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 SLC44A4Q53GD3 710 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 CERS6Q6ZMG9 384 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 CEP68Q76N32 757 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 IZUMO1Q8IYV9 350 aa12.13□□□□□ -0.47
TMEM170A-201ENST00000357613 CPA6Q8N4T0 437 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms