RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 FAM156AQ8NDB6 213 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 UBE2E3Q969T4 207 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 COL21A1Q96P44 957 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 GPR22Q99680 433 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 APBA2Q99767 749 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 TTYH2Q9BSA4 534 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 GPN1Q9HCN4 374 aaPredicted RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 FARSBQ9NSD9 589 aaKnown RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 UBQLN1Q9UMX0 589 aaKnown RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 I3L521 148 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ZNF197O14709 1029 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 PLD2O14939 933 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 LRCH4O75427 683 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 TMEM63AO94886 807 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 NUMBP49757 651 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ITCHQ96J02 903 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 NEURL2Q9BR09 285 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 WDR6Q9NNW5 1121 aaKnown RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 PNMA8BQ9ULN7 279 aaPredicted RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 MYO16Q9Y6X6 1858 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 A0A0J9YYE9 177 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 INMTO95050 263 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 VNN2O95498 520 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 SHMT1P34896 483 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 TTPAP49638 278 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ERVK-8P63133 956 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 KCTD2Q14681 263 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 NTAN1Q96AB6 310 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 MYO19Q96H55 970 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 TEKT5Q96M29 485 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 RIPOR3Q96MK2 946 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 MMP19Q99542 508 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 DHRS9Q9BPW9 319 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 SH3BP4Q9P0V3 963 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 STYXL1Q9Y6J8 313 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 FGF3P11487 239 aaPredicted RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 FAUP35544 74 aaKnown RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 NAGLUP54802 743 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 LIPEQ05469 1076 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 MSS51Q4VC12 460 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 CMASQ8NFW8 434 aaPredicted RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 RNASE11Q8TAA1 199 aaKnown RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 CLIP3Q96DZ5 547 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 FRMD6Q96NE9 622 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 CD274Q9NZQ7 290 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 IKZF3Q9UKT9 509 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 RNF6Q9Y252 685 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 CCDC88CQ9P219 2028 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 SH3D21A4FU49 640 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ACKR2O00590 384 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 RYKP34925 604 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 PLA2G16P53816 162 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 NIPAL4Q0D2K0 466 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 NUMA1Q14980 2115 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 PROX2Q3B8N5 592 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ATAD3CQ5T2N8 411 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ARHGAP36Q6ZRI8 547 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 GPRIN3Q6ZVF9 776 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 EEPD1Q7L9B9 569 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 RNF135Q8IUD6 432 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 RIOX2Q8IUF8 465 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ACOT12Q8WYK0 555 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 THRSPQ92748 146 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ZNF512Q96ME7 567 aaPredicted RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ACTR8Q9H981 624 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 FOLH1BQ9HBA9 442 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 SAE1Q9UBE0 346 aaPredicted RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 TJP2Q9UDY2 1190 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ASMTP46597 345 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 TGFB2P61812 414 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 KEAP1Q14145 624 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 SF3B4Q15427 424 aaKnown RBP eCLIP6.52□□□□□ -1.379e-13■■■■□ 23.5
TRIM38-201ENST00000357085 TBRG1Q3YBR2 411 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 DPY19L3Q6ZPD9 716 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 LHFPL3Q86UP9 236 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 RYBPQ8N488 228 aaPredicted RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 KLHL6Q8WZ60 621 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 DCPSQ96C86 337 aaKnown RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 C8orf48Q96LL4 319 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 CD93Q9NPY3 652 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 POU2F3Q9UKI9 436 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ACSL5Q9ULC5 683 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 SOCS2O14508 198 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 PRKYO43930 277 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 AXLP30530 894 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 MATKP42679 507 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 MRPL19P49406 292 aaKnown RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ARSFP54793 590 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 PITPNAQ00169 270 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ITKQ08881 620 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 HSDL1Q3SXM5 330 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 TXNDC5Q8NBS9 432 aaKnown RBP6.52□□□□□ -1.37
TRIM38-201ENST00000357085 OR6Q1Q8NGQ2 317 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 LMO3Q8TAP4 145 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 RXFP2Q8WXD0 754 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 RFKQ969G6 155 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 PHOX2BQ99453 314 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 DEFB129Q9H1M3 183 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 DSN1Q9H410 356 aa6.52□□□□□ -1.37
TRIM38-201ENST00000357085 ST3GAL5Q9UNP4 418 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms