RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 C6orf62Q9GZU0 229 aaPredicted RBP9.31□□□□□ -0.92
SMG6-202ENST00000354901 LTB4R2Q9NPC1 389 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 MAT2BQ9NZL9 334 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 PCDH10Q9P2E7 1040 aa9.31□□□□□ -0.92
SMG6-202ENST00000354901 SNTNA6NMZ2 147 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 BCAS1O75363 584 aaPredicted RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 HMBSP08397 361 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 CPB1P15086 417 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 ITIH1P19827 911 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 HCAR3P49019 387 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 WNT3AP56704 352 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 IL1RL1Q01638 556 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 PTPRCAPQ14761 206 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 UGP2Q16851 508 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 AGMOQ6ZNB7 445 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 GALNT6Q8NCL4 622 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 OR10T2Q8NGX3 314 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 MED30Q96HR3 178 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 NECTIN4Q96NY8 510 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 RTP3Q9BQQ7 232 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 EMILIN2Q9BXX0 1053 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 MRPL9Q9BYD2 267 aaKnown RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 WDR12Q9GZL7 423 aaKnown RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 OSBPL2Q9H1P3 480 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 AGO3Q9H9G7 860 aaKnown RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 FBRSL1Q9HCM7 1045 aaKnown RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 PRDM8Q9NQV8 689 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 GIMAP2Q9UG22 337 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 SLCO3A1Q9UIG8 710 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 CDH9Q9ULB4 789 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 TCAF1Q9Y4C2 921 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 KCTD3Q9Y597 815 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 PRORSD1PA6NEY8 169 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 TFECO14948 347 aaPredicted RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 MAFKO60675 156 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 RFPL2O75678 378 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 ANXA9O76027 345 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 SUPT7LO94864 414 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 TRIM16O95361 564 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 EIF2S1P05198 315 aaKnown RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 PTPN2P17706 415 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 YWHAQP27348 245 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 P2RX3P56373 397 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 KCNC4Q03721 635 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 PCBP1Q15365 356 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMG6-202ENST00000354901 FSCN1Q16658 493 aaKnown RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 ZFP69Q49AA0 526 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 RAB41Q5JT25 222 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 PM20D1Q6GTS8 502 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 DESI1Q6ICB0 168 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 PIM3Q86V86 326 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 DHFR2Q86XF0 187 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 GALNT12Q8IXK2 581 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 CELF2-AS1Q8N7Q2 184 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 BEND7Q8N7W2 519 aaPredicted RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 TERB1Q8NA31 727 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 OR7A2PQ8NGA2 310 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 NDNFQ8TB73 568 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 SH3RF2Q8TEC5 729 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 SLC45A3Q96JT2 553 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 FUNDC2Q9BWH2 189 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 ALG9Q9H6U8 611 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 ZBTB26Q9HCK0 441 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 ABI2Q9NYB9 513 aaPredicted RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 STMN3Q9NZ72 180 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 IPO11Q9UI26 975 aaKnown RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 TEKT2Q9UIF3 430 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 ZNF221Q9UK13 617 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 BAG5Q9UL15 447 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 ANKRD6Q9Y2G4 727 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 FNDC3AQ9Y2H6 1198 aaKnown RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 Q9Y3F1 56 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 TCAF2A6NFQ2 919 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 SDHDO14521 159 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 INPP4BO15327 924 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 TSC22D2O75157 780 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 H2AFYO75367 372 aaKnown RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 GJB3O75712 270 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 GSNP06396 782 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 ITGB6P18564 788 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 CD52P31358 61 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 TTKP33981 857 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 TGFBR1P36897 503 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 CD86P42081 329 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 KRT6CP48668 564 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 CPT1AP50416 773 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 PLA2G16P53816 162 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 C1QTNF8P60827 252 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 DAB2P98082 770 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 MADCAM1Q13477 382 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 MORN1Q5T089 497 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 RASAL3Q86YV0 1011 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 CAMK1DQ8IU85 385 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 GPR78Q96P69 363 aa9.3□□□□□ -0.92
SMG6-202ENST00000354901 DNMT3BQ9UBC3 853 aaKnown RBP9.3□□□□□ -0.92
SMG6-202ENST00000354901 A8MUA0 341 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 J3KR12 359 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 ACOT8O14734 319 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 IRAK2O43187 625 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 ALBP02768 609 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms