RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 MUC13Q9H3R2 512 aa22.03■■□□□ 1.12
NKX2-1-201ENST00000354822 ZNF696Q9H7X3 374 aa22.03■■□□□ 1.12
NKX2-1-201ENST00000354822 COQ10BQ9H8M1 238 aa22.03■■□□□ 1.12
NKX2-1-201ENST00000354822 PIDD1Q9HB75 910 aa22.03■■□□□ 1.12
NKX2-1-201ENST00000354822 ZNF225Q9UK10 706 aa22.03■■□□□ 1.12
NKX2-1-201ENST00000354822 FAM58BPP0C7Q3 252 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 ERVK-8P63133 956 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 ECT2LQ008S8 904 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 INPP5AQ14642 412 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 PDCD4Q53EL6 469 aaKnown RBP22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 SLC39A5Q6ZMH5 540 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 ADAMTSL2Q86TH1 951 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 DCAF4L2Q8NA75 395 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 IL1RL2Q9HB29 575 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 CCM2LQ9NUG4 571 aaPredicted RBP22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 SMPD4Q9NXE4 827 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 ACTR3BQ9P1U1 418 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 DNMT3BQ9UBC3 853 aaKnown RBP22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 VPS51Q9UID3 782 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 FNDC3AQ9Y2H6 1198 aaKnown RBP22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 PGLSO95336 258 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 CCL5P13501 91 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 ZNF7P17097 686 aaPredicted RBP22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 SLC6A2P23975 617 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 PRDX3P30048 256 aaKnown RBP22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 GRIA3P42263 894 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 DIO3P55073 304 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 RAB33AQ14088 237 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 IKBKEQ14164 716 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 RCAN2Q14206 197 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 PCBP2Q15366 365 aaKnown RBP eCLIP22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 FBXO48Q5FWF7 155 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 C6orf52Q5T4I8 152 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 RETSATQ6NUM9 610 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 ANKFN1Q8N957 763 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 LRCH3Q96II8 777 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 ZFRQ96KR1 1074 aaKnown RBP22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 RNF208Q9H0X6 261 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 SARS2Q9NP81 518 aaKnown RBP22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 ZIM2Q9NZV7 527 aa22.02■■□□□ 1.12
NKX2-1-201ENST00000354822 FXYD1O00168 92 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 PRRG1O14668 218 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 HNRNPRO43390 633 aaKnown RBP22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 SLC22A3O75751 556 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 BMP2P12643 396 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 RPS3P23396 243 aaKnown RBP eCLIP22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 RPL5P46777 297 aaKnown RBP22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 EPHB3P54753 998 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 POLE2P56282 527 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 CDH18Q13634 790 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 PPWD1Q96BP3 646 aaKnown RBP22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 SEMA6AQ9H2E6 1030 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 LZTS1Q9Y250 596 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 FCF1Q9Y324 198 aaKnown RBP22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 DYTNA2CJ06 578 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 GFRA2O00451 464 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 NPPAP01160 153 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 IL10P22301 178 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 GRIA2P42262 883 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 MAPK8P45983 427 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 CDKL1Q00532 357 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 CNPY1Q3B7I2 92 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 PITRM1Q5JRX3 1037 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 LCN8Q6JVE9 175 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 FRA10AC1Q70Z53 315 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 PIH1D2Q8WWB5 315 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 ALG14Q96F25 216 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 MYO19Q96H55 970 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 C2orf49Q9BVC5 232 aaPredicted RBP22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 MRPS26Q9BYN8 205 aaKnown RBP22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 SLC2A11Q9BYW1 496 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 CMTM6Q9NX76 183 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 CNOT6Q9ULM6 557 aaKnown RBP22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 PCDHA9Q9Y5H5 950 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 SLC4A7Q9Y6M7 1214 aa22.01■■□□□ 1.11
NKX2-1-201ENST00000354822 EEDO75530 441 aaKnown RBP22■■□□□ 1.11
NKX2-1-201ENST00000354822 CSPG5O95196 566 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 CLPTM1O96005 669 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 SMIM18P0DKX4 95 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 PSMC3P17980 439 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 CSKP41240 450 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 CREB5Q02930 508 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 LYSMD3Q7Z3D4 306 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 SPDYE1Q8NFV5 336 aaPredicted RBP22■■□□□ 1.11
NKX2-1-201ENST00000354822 CANT1Q8WVQ1 401 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 TMEM169Q96HH4 297 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 CLPBQ9H078 707 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 SUN2Q9UH99 717 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 EIF2B4Q9UI10 523 aaKnown RBP22■■□□□ 1.11
NKX2-1-201ENST00000354822 LEF1Q9UJU2 399 aaPredicted RBP22■■□□□ 1.11
NKX2-1-201ENST00000354822 BRCA2P51587 3418 aa22■■□□□ 1.11
NKX2-1-201ENST00000354822 S100BP04271 92 aaPredicted RBP21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 GSTT1P30711 240 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 SH3BGRP55822 239 aaPredicted RBP21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 ROR2Q01974 943 aaKnown RBP21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 TLE2Q04725 743 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 NFYCQ13952 458 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 PTPRRQ15256 657 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms