RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 HDDC3Q8N4P3 179 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 TXNDC5Q8NBS9 432 aaKnown RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 RHEBL1Q8TAI7 183 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 FAM3CQ92520 227 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 PTERQ96BW5 349 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 ERLEC1Q96DZ1 483 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 SEC16BQ96JE7 1060 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 SCYL1Q96KG9 808 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 ASB2Q96Q27 587 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 WRAP53Q9BUR4 548 aaKnown RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 GATA5Q9BWX5 397 aaPredicted RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 FAM107BQ9H098 131 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 TFB2MQ9H5Q4 396 aaKnown RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 XPR1Q9UBH6 696 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 MBD1Q9UIS9 605 aaPredicted RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 GNPTGQ9UJJ9 305 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 CCDC189A1A4V9 331 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 TSPAN6O43657 245 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 ITM2AO43736 263 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 SLC25A14O95258 325 aaPredicted RBP10.85□□□□□ -0.67
ECM1-201ENST00000346569 TGDSO95455 350 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 SOD1P00441 154 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 SERPINE1P05121 402 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 MYL2P10916 166 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 NEFHP12036 1026 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 C6P13671 934 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 ATP1B2P14415 290 aaPredicted RBP10.85□□□□□ -0.67
ECM1-201ENST00000346569 IL9P15248 144 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 GRK2P25098 689 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 ARRB2P32121 409 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 PRKAA2P54646 552 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 DNAJB13P59910 316 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 CCDC15Q0P6D6 951 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 PTRHD1Q6GMV3 140 aaKnown RBP10.85□□□□□ -0.67
ECM1-201ENST00000346569 KLC3Q6P597 504 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 NAPRTQ6XQN6 538 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 CYHR1Q6ZMK1 362 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 TMPRSS6Q8IU80 811 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 PELI3Q8N2H9 469 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 SIDT2Q8NBJ9 832 aaKnown RBP10.85□□□□□ -0.67
ECM1-201ENST00000346569 DDHD1Q8NEL9 900 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 EEF1AKMT1Q8WVE0 214 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 INPP5DQ92835 1189 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 GLYATL1Q969I3 302 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 KIAA1191Q96A73 305 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 FAM136AQ96C01 138 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 AP2M1Q96CW1 435 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 C7orf26Q96N11 449 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 ATOH8Q96SQ7 321 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 TSSK1BQ9BXA7 367 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 UNKQ9C0B0 810 aaKnown RBP10.85□□□□□ -0.67
ECM1-201ENST00000346569 NSRP1Q9H0G5 558 aaKnown RBP10.85□□□□□ -0.67
ECM1-201ENST00000346569 ZNF395Q9H8N7 513 aaPredicted RBP10.85□□□□□ -0.67
ECM1-201ENST00000346569 THAP1Q9NVV9 213 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 KCTD5Q9NXV2 234 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 SERGEFQ9UGK8 458 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 TRMT6Q9UJA5 497 aaKnown RBP10.85□□□□□ -0.67
ECM1-201ENST00000346569 IKZF3Q9UKT9 509 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 COQ6Q9Y2Z9 468 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 ATG2BQ96BY7 2078 aa10.85□□□□□ -0.67
ECM1-201ENST00000346569 PLXNB3Q9ULL4 1909 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 E5RI56 91 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 MAN2B1O00754 1011 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 MTHFD2P13995 350 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 HOXB2P14652 356 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 CD72P21854 359 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 ATP5F1P24539 256 aaPredicted RBP10.84□□□□□ -0.67
ECM1-201ENST00000346569 IL2P60568 153 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 ATP6V0D1P61421 351 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 STARD3Q14849 445 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 CRY1Q16526 586 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 ZNF284Q2VY69 593 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 KHDC1Q4VXA5 237 aaKnown RBP10.84□□□□□ -0.67
ECM1-201ENST00000346569 LDLRAP1Q5SW96 308 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 GKAP1Q5VSY0 366 aaPredicted RBP10.84□□□□□ -0.67
ECM1-201ENST00000346569 LIPMQ5VYY2 423 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 FOXR1Q6PIV2 292 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 C6orf89Q6UWU4 347 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 TMEM92Q6UXU6 159 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 ZCCHC23Q6ZST2 131 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 LKAAEAR1Q8TD35 194 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 CXorf40AQ8TE69 158 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 NAT14Q8WUY8 206 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 ALG9Q9H6U8 611 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 SPATS2LQ9NUQ6 558 aaKnown RBP10.84□□□□□ -0.67
ECM1-201ENST00000346569 A0A1W2PP55 124 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 IGLON5A6NGN9 336 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 NEMP1O14524 444 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 LZTS3O60299 673 aaPredicted RBP10.84□□□□□ -0.67
ECM1-201ENST00000346569 AP2A2O94973 939 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 OR56A5P0C7T3 313 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 CHRNB1P11230 501 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 AOAHP28039 575 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 CCR7P32248 378 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 SLC1A6P48664 564 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 NAGLUP54802 743 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 ABCE1P61221 599 aaKnown RBP10.84□□□□□ -0.67
ECM1-201ENST00000346569 TFF2Q03403 129 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 ZBTB16Q05516 673 aa10.84□□□□□ -0.67
ECM1-201ENST00000346569 TMEM115Q12893 351 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms