RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SLC34A3Q8N130 599 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SPPL2BQ8TCT7 592 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ASZ1Q8WWH4 475 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 OSMRQ99650 979 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SLC39A3Q9BRY0 314 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 MEAF6Q9HAF1 191 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 PFDN2Q9UHV9 154 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CLDN5O00501 218 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 EGFRP00533 1210 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 TM4SF1P30408 202 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 NDST2P52849 883 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 RELAQ04206 551 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 NIPAL4Q0D2K0 466 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 TMEM132BQ14DG7 1078 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 KIAA0930Q6ICG6 404 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 USP45Q70EL2 814 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CAND1Q86VP6 1230 aaKnown RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 KIAA0319LQ8IZA0 1049 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 DPP10Q8N608 796 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CSGALNACT1Q8TDX6 532 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 YME1L1Q96TA2 773 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CCDC32Q9BV29 185 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 KLHL1Q9NR64 748 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 FBXW11Q9UKB1 542 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 A8MT66 165 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 H3BMQ9 156 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 GPC1P35052 558 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 STT3AP46977 705 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 EEFSECP57772 596 aaKnown RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 VBP1P61758 197 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 PWP1Q13610 501 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 NPTX1Q15818 432 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 LRRN4Q8WUT4 740 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 BHMTQ93088 406 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 PPM1MQ96MI6 270 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 COG8Q96MW5 612 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ANGPT4Q9Y264 503 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 TAF1P21675 1872 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 NOTOA8MTQ0 251 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ARPC2O15144 300 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 B4GALT5O43286 388 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CYP3A5P20815 502 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PTPN3P26045 913 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 DNAJA1P31689 397 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 HCAR3P49019 387 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF132P52740 706 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GABARAPL2P60520 117 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 DNASE1L3Q13609 305 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 XKR5Q6UX68 686 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TOP6BLQ8N6T0 577 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 KBTBD7Q8WVZ9 684 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 AKT1S1Q96B36 256 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 RNF38Q9H0F5 515 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 DCSTAMPQ9H295 470 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GLOD4Q9HC38 313 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ACSS2Q9NR19 701 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MAGEB17A8MXT2 336 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CASKO14936 926 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 DYNC1LI2O43237 492 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 HPRP00739 348 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF182P17025 639 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 HOXD12P35452 270 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ST8SIA6P61647 398 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 NFATC3Q12968 1075 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 DLG2Q15700 870 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ESRP1Q6NXG1 681 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 METTL3Q86U44 580 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 C9orf43Q8TAL5 461 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SLC35F5Q8WV83 523 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PIH1D2Q8WWB5 315 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 NTAN1Q96AB6 310 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TFB2MQ9H5Q4 396 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 RPF2Q9H7B2 306 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 STX16-NPEPL1H3BU86 382 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CXCR6O00574 342 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PER2O15055 1255 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 RSL1D1O76021 490 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 AHSGP02765 367 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ARF4P18085 180 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GRK4P32298 578 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CAMK2GQ13555 558 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ATP6AP1Q15904 470 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 DPY19L1Q2PZI1 675 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF404Q494X3 552 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SYCE2Q6PIF2 218 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ELMSAN1Q6PJG2 1045 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CNSTQ6PJW8 725 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 STON2Q8WXE9 905 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 AZIN2Q96A70 460 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF607Q96SK3 696 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 AGO3Q9H9G7 860 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 LIN28AQ9H9Z2 209 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GBA2Q9HCG7 927 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GDAP2Q9NXN4 497 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 DYRK1BQ9Y463 629 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PTCH2Q9Y6C5 1203 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 A0A1W2PPW3 197 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MSCO60682 206 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GUCY1B2O75343 617 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MT-CYBP00156 380 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms