RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SPATS1Q496A3 300 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZNF470Q6ECI4 717 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 MFSD5Q6N075 450 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 AGMOQ6ZNB7 445 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 NT5DC4Q86YG4 428 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 GHDCQ8N2G8 530 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ARL14Q8N4G2 192 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 REEP4Q9H6H4 257 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SEMA3GQ9NS98 782 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 PPP4R1LQ9P1A2 415 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZSWIM5Q9P217 1185 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ASF1AQ9Y294 204 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 A0A096LPK6 155 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 TDP2O95551 362 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 BUD31P41223 144 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 TTLL4Q14679 1199 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 CRY2Q49AN0 593 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ALG1LQ6GMV1 187 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 NIPAL3Q6P499 406 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ARSKQ6UWY0 536 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 G2E3Q7L622 706 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZNF550Q7Z398 422 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 OR51D1Q8NGF3 324 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 OR10R2Q8NGX6 335 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SGCDQ92629 289 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 TMEM246Q9BRR3 403 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 C14orf93Q9H972 538 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 USP29Q9HBJ7 922 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SLCO1B3Q9NPD5 702 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SLC38A7Q9NVC3 462 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 XKRYO14609 159 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 DFNA5O60443 496 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 LTFP02788 710 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 GALK2Q01415 458 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 EXOC3L2Q2M3D2 409 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZNF697Q5TEC3 545 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ATG9BQ674R7 924 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 USP51Q70EK9 711 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZNF227Q86WZ6 799 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SLC30A8Q8IWU4 369 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 PNLDC1Q8NA58 520 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 REPS2Q8NFH8 660 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ACSBG1Q96GR2 724 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ACBD6Q9BR61 282 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ACE2Q9BYF1 805 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 YTHDF1Q9BYJ9 559 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 OPTCQ9UBM4 332 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 PLA2G4CQ9UP65 541 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 PLEKHM1Q9Y4G2 1056 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 CDH10Q9Y6N8 788 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 LCHNA4D1U4 455 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ARHGEF15O94989 841 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PAHP00439 452 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SAGP10523 405 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 PPM1AP35813 382 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ELK3P41970 407 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 NAE1Q13564 534 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 RAPSNQ13702 412 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 MFSD10Q14728 455 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 TIGD3Q6B0B8 471 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 JAZF1Q86VZ6 243 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 HID1Q8IV36 788 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 GALNT11Q8NCW6 608 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 OR5T3Q8NGG3 340 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 TESCQ96BS2 214 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 HYLS1Q96M11 299 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 FAM217BQ9NTX9 383 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 C1orf109Q9NX04 203 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ADGRE2Q9UHX3 823 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 TTC34A8MYJ7 566 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PRSS44E7EML9 344 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 BOLA2-SMG1P6H3BVE0 249 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CREBL2O60519 120 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 BMP3P12645 472 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PCSK2P16519 638 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CTNNB1P35222 781 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SREBF2Q12772 1141 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 IL31Q6EBC2 164 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SLC30A10Q6XR72 485 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 KIF12Q96FN5 646 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 QRFPRQ96P65 431 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 OR52E6Q96RD3 313 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 GAD1Q99259 594 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 HEPHQ9BQS7 1158 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ZNF518BQ9C0D4 1074 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 LSM7Q9UK45 103 aaKnown RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 A2MP01023 1474 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 BHMG1C9JSJ3 638 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 OR7A17O14581 309 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PRKAR1BP31321 381 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SLC1A2P43004 574 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 BTDP43251 543 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CLK2P49760 499 aaKnown RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 GEMP55040 296 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 GK2Q14410 553 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 KLHDC7AQ5VTJ3 777 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SLFN11Q7Z7L1 901 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 DPP9Q86TI2 863 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CREG2Q8IUH2 290 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ZFP3Q96NJ6 502 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms