RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SIN3BO75182 1162 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 NR2F6P10588 404 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 LMO2P25791 158 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 TIE1P35590 1138 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 SLC7A2P52569 658 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 BROXQ5VW32 411 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 MON1BQ7L1V2 547 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 NOL11Q9H8H0 719 aaKnown RBP14.89□□□□□ -0.03
UBE3B-202ENST00000342494 MAGEL2Q9UJ55 1249 aa14.89□□□□□ -0.03
UBE3B-202ENST00000342494 KPNA4O00629 521 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-202ENST00000342494 LYNP07948 512 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 CCL5P13501 91 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 CTSOP43234 321 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-202ENST00000342494 FUT2Q10981 343 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 C4orf32Q8N8J7 132 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 ZMIZ2Q8NF64 920 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 IKZF2Q9UKS7 526 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 A0A0U1RQJ8 604 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 FAM92AA1XBS5 289 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 TRAFD1O14545 582 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-202ENST00000342494 ASNA1O43681 348 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 IL12BP29460 328 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 TAS2R50P59544 299 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 MZT2BQ6NZ67 158 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 SAPCD2Q86UD0 394 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 DAW1Q8N136 415 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 PYROXD2Q8N2H3 581 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 SHDQ96IW2 340 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 SNX10Q9Y5X0 201 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 KIF1AQ12756 1690 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 CCL22O00626 93 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 WNT7AO00755 349 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 SNAP91O60641 907 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 HNRNPH3P31942 346 aaKnown RBP14.88□□□□□ -0.03
UBE3B-202ENST00000342494 INAVAQ3KP66 663 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 TTMPQ5BVD1 217 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 TMEM164Q5U3C3 297 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 LIN54Q6MZP7 749 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 CNKSR3Q6P9H4 555 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 ABRAXAS1Q6UWZ7 409 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 TRPV3Q8NET8 790 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 TRMT61BQ9BVS5 477 aaKnown RBP14.88□□□□□ -0.03
UBE3B-202ENST00000342494 PCBD2Q9H0N5 130 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 HMG20AQ9NP66 347 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 A0A1W2PPM1 405 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 RGS8P57771 180 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-202ENST00000342494 PPIDQ08752 370 aaKnown RBP14.88□□□□□ -0.03
UBE3B-202ENST00000342494 CHIT1Q13231 466 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 SLC10A6Q3KNW5 377 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 LDLRAP1Q5SW96 308 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 DNAJB7Q7Z6W7 309 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-202ENST00000342494 AMER2Q8N7J2 671 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 LEMD2Q8NC56 503 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 OR7A2PQ8NGA2 310 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 NXNL1Q96CM4 212 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 MPP4Q96JB8 637 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 GMEB2Q9UKD1 530 aa14.88□□□□□ -0.03
UBE3B-202ENST00000342494 BBIP1A8MTZ0 92 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 UBXN7O94888 489 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 NUDT17P0C025 328 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 ACTR1BP42025 376 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 CASP9P55211 416 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 ACTR1AP61163 376 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 HNRNPDQ14103 355 aaKnown RBP14.87□□□□□ -0.03
UBE3B-202ENST00000342494 RFX4Q33E94 735 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 TIGD5Q53EQ6 642 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 BRSK1Q8TDC3 778 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 PIH1D2Q8WWB5 315 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 TRNT1Q96Q11 434 aaKnown RBP14.87□□□□□ -0.03
UBE3B-202ENST00000342494 GPER1Q99527 375 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 TMEM138Q9NPI0 162 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 ADGRE2Q9UHX3 823 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 FKBPLQ9UIM3 349 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 TIMM22Q9Y584 194 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 TCEA1P23193 301 aaKnown RBP14.87□□□□□ -0.03
UBE3B-202ENST00000342494 RABGGTBP53611 331 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 SLC13A2Q13183 592 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 RNF43Q68DV7 783 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 ESRP1Q6NXG1 681 aaKnown RBP14.87□□□□□ -0.03
UBE3B-202ENST00000342494 FBXO15Q8NCQ5 510 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-202ENST00000342494 C12orf42Q96LP6 360 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 SIRPGQ9P1W8 387 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 MAP4K5Q9Y4K4 846 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 CAMTA1Q9Y6Y1 1673 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 UBE2QL1A1L167 161 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 LIN7AO14910 233 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-202ENST00000342494 GOT2P00505 430 aaKnown RBP14.87□□□□□ -0.03
UBE3B-202ENST00000342494 BPGMP07738 259 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 RYKP34925 604 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 COQ7Q99807 217 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 SLC35C2Q9NQQ7 365 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 COMMD9Q9P000 198 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 TMCC2O75069 709 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 MPSTP25325 297 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 MPP1Q00013 466 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 GCNT6Q5T4J0 391 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 AUTS2Q8WXX7 1259 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 B3GALT6Q96L58 329 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 CDH7Q9ULB5 785 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 GRIN2DO15399 1336 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms