RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SLC7A4O43246 635 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 GSTM1P09488 218 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 HAPLN1P10915 354 aaPredicted RBP12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 CHI3L1P36222 383 aaPredicted RBP12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 ACSM2AQ08AH3 577 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 FAM187BQ17R55 369 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 FGD3Q5JSP0 725 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 ACSM2BQ68CK6 577 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 GPR180Q86V85 440 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 SETD9Q8NE22 299 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 C16orf70Q9BSU1 422 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 CIPCQ9C0C6 399 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 NUAK2Q9H093 628 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 VRTNQ9H8Y1 702 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 MAGEL2Q9UJ55 1249 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 OGDHLQ9ULD0 1010 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 PDE10AQ9Y233 779 aa12.32□□□□□ -0.44
SNRNP48-201ENST00000342415 CROCCQ5TZA2 2017 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 ECI2O75521 394 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 SLC25A14O95258 325 aaPredicted RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 POU2F1P14859 743 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 FUT4P22083 530 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 GLDCP23378 1020 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 POLD2P49005 469 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 CDK9P50750 372 aaKnown RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 BCL2L1Q07817 233 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 TUSC3Q13454 348 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 ALFQ53S48 1182 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 ZNF549Q6P9A3 640 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 SLC15A3Q8IY34 581 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 ZNF513Q8N8E2 541 aaPredicted RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 AURKBQ96GD4 344 aaPredicted RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 GPBP1L1Q9HC44 474 aaPredicted RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 GIMAP4Q9NUV9 329 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 HS3ST4Q9Y661 456 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 A0A0G2JLL6 359 aaPredicted RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 H0Y858 1186 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 OTCP00480 354 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 SPATA31D3P0C874 917 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 AKR1A1P14550 325 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 CD1EP15812 388 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 HERC3Q15034 1050 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 TJAP1Q5JTD0 557 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 LRRC73Q5JTD7 316 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 SPATA31D4Q6ZUB0 917 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 PRRT2Q7Z6L0 340 aaPredicted RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 ZC3H7AQ8IWR0 971 aaKnown RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 MCFD2Q8NI22 146 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 MTERF3Q96E29 417 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 ABHD8Q96I13 439 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 FOPNLQ96NB1 174 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 PCDHGB5Q9Y5G0 923 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 TNPO3Q9Y5L0 923 aaKnown RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 RAI2Q9Y5P3 530 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 MYO10Q9HD67 2058 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 ELOVL7A1L3X0 281 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 PIRO00625 290 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 ASNA1O43681 348 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 TSC22D2O75157 780 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 CYP7B1O75881 506 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 PRKD3O94806 890 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 NDST3O95803 873 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 TYMPP19971 482 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 INAQ16352 499 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 CMPK2Q5EBM0 449 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 SPANXN2Q5MJ10 180 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 FBXL22Q6P050 247 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 ZNF598Q86UK7 904 aaKnown RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 BIRC7Q96CA5 298 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 CDKN2AIPNLQ96HQ2 116 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 PPP3R2Q96LZ3 170 aa12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 INTS7Q9NVH2 962 aaKnown RBP12.31□□□□□ -0.44
SNRNP48-201ENST00000342415 A0A0J9YVX5 310 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PHLPP1O60346 1717 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 CDK14O94921 469 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 HOXB8P17481 243 aaPredicted RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 ARRB2P32121 409 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 GRIA2P42262 883 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PGM2L1Q6PCE3 622 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 CILP2Q8IUL8 1156 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 ARL10Q8N8L6 244 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 MCOLN3Q8TDD5 553 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 CAMKK2Q96RR4 588 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 DDX60Q8IY21 1712 aaKnown RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PRR23AA6NEV1 266 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 TBKBP1A7MCY6 615 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PRMT5O14744 637 aaPredicted RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 BCKDKO14874 412 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 EPN2O95208 641 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 RHOQP17081 205 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 RPL17P18621 184 aaKnown RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PCSK6P29122 969 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 CDKN2DP55273 166 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 TRAP1Q12931 704 aaKnown RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 TYW3Q6IPR3 259 aaKnown RBP12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 PHACTR4Q8IZ21 702 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 UBASH3BQ8TF42 649 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 EEF1AKMT1Q8WVE0 214 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 TAMM41Q96BW9 452 aa12.3□□□□□ -0.44
SNRNP48-201ENST00000342415 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms