RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 PEX13Q92968 403 aa14.57□□□□□ -0.08
PBX3-201ENST00000342287 RMDN1Q96DB5 314 aa14.57□□□□□ -0.08
PBX3-201ENST00000342287 OTUB2Q96DC9 234 aa14.57□□□□□ -0.08
PBX3-201ENST00000342287 MCMBPQ9BTE3 642 aa14.57□□□□□ -0.08
PBX3-201ENST00000342287 TDRD1Q9BXT4 1180 aaKnown RBP14.57□□□□□ -0.08
PBX3-201ENST00000342287 VPS11Q9H270 941 aa14.57□□□□□ -0.08
PBX3-201ENST00000342287 LINC00597Q9H2U6 94 aa14.57□□□□□ -0.08
PBX3-201ENST00000342287 PCDH12Q9NPG4 1184 aa14.57□□□□□ -0.08
PBX3-201ENST00000342287 ABCB8Q9NUT2 735 aa14.57□□□□□ -0.08
PBX3-201ENST00000342287 IFT52Q9Y366 437 aa14.57□□□□□ -0.08
PBX3-201ENST00000342287 RAI2Q9Y5P3 530 aa14.57□□□□□ -0.08
PBX3-201ENST00000342287 CXorf51AA0A1B0GTR3 108 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 PSMD12O00232 456 aaPredicted RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 LDB2O43679 373 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 KLHL41O60662 606 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 PAPLNO95428 1278 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 TYK2P29597 1187 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 HADHAP40939 763 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 TMC5Q6UXY8 1006 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 CDHR3Q6ZTQ4 885 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 ZNF557Q8N988 423 aaPredicted RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 ITFG1Q8TB96 612 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 LMLNQ96KR4 655 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 FAM111AQ96PZ2 611 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 HAUS8Q9BT25 410 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 BBS2Q9BXC9 721 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 ADGRE3Q9BY15 652 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 UNKQ9C0B0 810 aaKnown RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 CDH19Q9H159 772 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 SPHK2Q9NRA0 654 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 PCDHGC4Q9Y5F7 938 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 CHD7Q9P2D1 2997 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 DOCK6Q96HP0 2047 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 GMNNO75496 209 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 PRLP01236 227 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 NELFEP18615 380 aaKnown RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 ARL1P40616 181 aaPredicted RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 ETV4P43268 484 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 IRX4P78413 519 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 ADGRG2Q8IZP9 1017 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.56□□□□□ -0.08
PBX3-201ENST00000342287 OR13J1Q8NGT2 312 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 ATXN7L3BQ96GX2 97 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 TSSK1BQ9BXA7 367 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 SLC28A3Q9HAS3 691 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 KCNK13Q9HB14 408 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 CCDC177Q9NQR7 707 aaPredicted RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 INTS6Q9UL03 887 aaKnown RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 PCDHGA11Q9Y5H2 935 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 GBF1Q92538 1859 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 NEDD8-MDP1E9PL57 170 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 K7ERQ8 282 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 SLC9A3R1O14745 358 aaPredicted RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 AHSGP02765 367 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 ABCB1P08183 1280 aaPredicted RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 DHRS4L1P0CG22 281 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 JAK1P23458 1154 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 HLA-FP30511 346 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 IST1P53990 364 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.56□□□□□ -0.08
PBX3-201ENST00000342287 CADM3Q8N126 398 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 CELF5Q8N6W0 485 aaKnown RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 ISL2Q96A47 359 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 VPS39Q96JC1 886 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 CDCA3Q99618 268 aaPredicted RBP14.56□□□□□ -0.08
PBX3-201ENST00000342287 RHOJQ9H4E5 214 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 SFXN1Q9H9B4 322 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 DCDC2Q9UHG0 476 aa14.56□□□□□ -0.08
PBX3-201ENST00000342287 CHD9Q3L8U1 2897 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 NOTCH4Q99466 2003 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 ARHGAP33O14559 1287 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 SLC7A4O43246 635 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 ZNF23P17027 643 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 AP1S1P61966 158 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 KCNC4Q03721 635 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 CTBP1Q13363 440 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 CCNIQ14094 377 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 PITRM1Q5JRX3 1037 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 KIAA0408Q6ZU52 694 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 ZC3HC1Q86WB0 502 aaKnown RBP14.55□□□□□ -0.08
PBX3-201ENST00000342287 DENND6AQ8IWF6 608 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 KIAA2013Q8IYS2 634 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 C2CD4AQ8NCU7 369 aaPredicted RBP14.55□□□□□ -0.08
PBX3-201ENST00000342287 SNX15Q9NRS6 342 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 CRNNQ9UBG3 495 aaPredicted RBP14.55□□□□□ -0.08
PBX3-201ENST00000342287 RIMKLBQ9ULI2 386 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 HELZP42694 1942 aaKnown RBP14.55□□□□□ -0.08
PBX3-201ENST00000342287 SMAD6O43541 496 aaKnown RBP14.55□□□□□ -0.08
PBX3-201ENST00000342287 PEX1O43933 1283 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 WEE1P30291 646 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 NKX2-5P52952 324 aaPredicted RBP14.55□□□□□ -0.08
PBX3-201ENST00000342287 PRAMEP78395 509 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 SLC25A3Q00325 362 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 ACVR1Q04771 509 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 KCNC3Q14003 757 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 LY6G5CQ5SRR4 150 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 ZNF470Q6ECI4 717 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 PRR23CQ6ZRP0 262 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 GRIN3AQ8TCU5 1115 aa14.55□□□□□ -0.08
PBX3-201ENST00000342287 HDAC10Q969S8 669 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms