RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SLC46A1Q96NT5 459 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 C19orf43Q9BQ61 176 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 ASCL3Q9NQ33 180 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 SMOXQ9NWM0 555 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.2■□□□□ 0.021e-8■■■■□ 24.5
VAPA-201ENST00000340541 FKBPLQ9UIM3 349 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 APPL1Q9UKG1 709 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 RNF215Q9Y6U7 377 aa15.2■□□□□ 0.02
VAPA-201ENST00000340541 UNC13CQ8NB66 2214 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 A0A1W2PQM1 296 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 A6NCN8 305 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 ERI2A8K979 691 aaKnown RBP15.19■□□□□ 0.02
VAPA-201ENST00000340541 AGAP14A8MT82 685 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 NUDT21O43809 227 aaKnown RBP15.19■□□□□ 0.02
VAPA-201ENST00000340541 VEGFDO43915 354 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 SUN1O94901 812 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 ECEL1O95672 775 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 CRTAMO95727 393 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 ACP5P13686 325 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 PNLIPP16233 465 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 TPH1P17752 444 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 RBMS1P29558 406 aaKnown RBP15.19■□□□□ 0.02
VAPA-201ENST00000340541 FDFT1P37268 417 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 KCNJ1P48048 391 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 PDX1P52945 283 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 CXADRP78310 365 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 SEMA5AQ13591 1074 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 GPRC6AQ5T6X5 926 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 MICALCLQ6ZW33 695 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 ZNF438Q7Z4V0 828 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 C11orf96Q7Z7L8 435 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 ARL14Q8N4G2 192 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 DDHD1Q8NEL9 900 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 KCNE4Q8WWG9 221 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 PBKQ96KB5 322 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 PIH1D1Q9NWS0 290 aaKnown RBP15.19■□□□□ 0.02
VAPA-201ENST00000340541 LRIT1Q9P2V4 623 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 TBC1D29Q9UFV1 150 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 SLC23A2Q9UGH3 650 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 TTC7AQ9ULT0 858 aaPredicted RBP15.19■□□□□ 0.02
VAPA-201ENST00000340541 PYCARDQ9ULZ3 195 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 KCNK6Q9Y257 313 aa15.19■□□□□ 0.02
VAPA-201ENST00000340541 HELZ2Q9BYK8 2649 aaKnown RBP15.19■□□□□ 0.02
VAPA-201ENST00000340541 C1QL1O75973 258 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 CDK14O94921 469 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 PRAMEF1O95521 474 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 PSMA3P25788 255 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 GRIA1P42261 906 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 CLCNKAP51800 687 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 CCL7P80098 99 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 TMEM115Q12893 351 aaPredicted RBP15.18■□□□□ 0.02
VAPA-201ENST00000340541 PEX6Q13608 980 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 ITGA9Q13797 1035 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 GSE1Q14687 1217 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 NR1D2Q14995 579 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 KCTD19Q17RG1 926 aaPredicted RBP15.18■□□□□ 0.02
VAPA-201ENST00000340541 CRTC3Q6UUV7 619 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 SPRED1Q7Z699 444 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 LINC00523Q86TU6 105 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 CCDC89Q8N998 374 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 OR52K1Q8NGK4 314 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 ZNF398Q8TD17 642 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 COG1Q8WTW3 980 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 LRRC45Q96CN5 670 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 RAB6BQ9NRW1 208 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 PAK5Q9P286 719 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 ENTPD2Q9Y5L3 495 aa15.18■□□□□ 0.02
VAPA-201ENST00000340541 KIF26BQ2KJY2 2108 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 MROH6A6NGR9 719 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 TMX2-CTNND1H3BSU7 103 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 CCL22O00626 93 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 PPM1DO15297 605 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 KIF5CO60282 957 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 SRP72O76094 671 aaKnown RBP15.17■□□□□ 0.02
VAPA-201ENST00000340541 TMPRSS15P98073 1019 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 B4GALNT1Q00973 533 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 PDE1BQ01064 536 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 NFATC2Q13469 925 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 POU6F1Q14863 301 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 LDLRAP1Q5SW96 308 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 TTC27Q6P3X3 843 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 LRRTM4Q86VH4 590 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 CCNJLQ8IV13 435 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 SFRP1Q8N474 314 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 RASGEF1AQ8N9B8 481 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 WDR36Q8NI36 951 aaKnown RBP15.17■□□□□ 0.02
VAPA-201ENST00000340541 DNAJC1Q96KC8 554 aaKnown RBP15.17■□□□□ 0.02
VAPA-201ENST00000340541 OSBPL9Q96SU4 736 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 CASS4Q9NQ75 786 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 HOMER3Q9NSC5 361 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 SMARCAL1Q9NZC9 954 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 SATB2Q9UPW6 733 aa15.17■□□□□ 0.02
VAPA-201ENST00000340541 MGAQ8IWI9 3026 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 A0A1W2PNU3 283 aaPredicted RBP15.16■□□□□ 0.02
VAPA-201ENST00000340541 CDRT15L2A8MXV6 281 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 H7C0S8 307 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 KMOO15229 486 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 B4GAT1O43505 415 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 PRB1P04280 392 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 RPLP0P05388 317 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms