RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 KLHL35Q6PF15 583 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 KIAA1324Q6UXG2 1013 aaKnown RBP7.55□□□□□ -1.2
HIPK1-201ENST00000340480 TERB1Q8NA31 727 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 C3orf58Q8NDZ4 430 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 ADCY4Q8NFM4 1077 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 GDPD5Q8WTR4 605 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 ELMO1Q92556 727 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 FAM136AQ96C01 138 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 RCN3Q96D15 328 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 LRIG1Q96JA1 1093 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 SLC28A3Q9HAS3 691 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 SNX13Q9Y5W8 968 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 KCNE2Q9Y6J6 123 aa7.55□□□□□ -1.2
HIPK1-201ENST00000340480 ANKRD66B4E2M5 251 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 DLDP09622 509 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 HNRNPLP14866 589 aaKnown RBP eCLIP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 RPL17P18621 184 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 HTR1BP28222 390 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 HPCAL1P37235 193 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 NKX3-2P78367 333 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 PCLAFQ15004 111 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 INAVAQ3KP66 663 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TBCELQ5QJ74 424 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 ZBTB49Q6ZSB9 765 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TTC7BQ86TV6 843 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 LRRTM3Q86VH5 581 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 P3H2Q8IVL5 708 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 CENPLQ8N0S6 344 aaPredicted RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 CLEC4FQ8N1N0 589 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 NPWQ8N729 165 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 ZNF781Q8N8C0 355 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 CXorf40AQ8TE69 158 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 SELENOMQ8WWX9 145 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 MRGPRX2Q96LB1 330 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 PAAF1Q9BRP4 392 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 FAM192AQ9GZU8 254 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 ABI3Q9P2A4 366 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 EVLQ9UI08 416 aaPredicted RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 FKBPLQ9UIM3 349 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 NUDT14O95848 222 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 OAS1P00973 400 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 PTDSS1P48651 473 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 ATP4BP51164 291 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TBC1D25Q3MII6 688 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TRMT11Q7Z4G4 463 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 CAMK1DQ8IU85 385 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 RNASE11Q8TAA1 199 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 SMG7Q92540 1137 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 USP7Q93009 1102 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 ZFRQ96KR1 1074 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 PRICKLE1Q96MT3 831 aaPredicted RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TMEM209Q96SK2 561 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 CEP44Q9C0F1 390 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TMLHEQ9NVH6 421 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 MFHAS1Q9Y4C4 1052 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 PCDHGC4Q9Y5F7 938 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 ZCWPW2A0A1B0GU75 182 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 FOXO6A8MYZ6 492 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 H7C0S8 307 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 J3KR12 359 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 ENTPD5O75356 428 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 PABPC1P11940 636 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 ANPEPP15144 967 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 AP1S2P56377 157 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TRIM32Q13049 653 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 C14orf80Q86SX3 495 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 CPA6Q8N4T0 437 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 KIAA1191Q96A73 305 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 SLC39A13Q96H72 371 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 CADM1Q9BY67 442 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 UNKQ9C0B0 810 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 IL1RL2Q9HB29 575 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 FANCFQ9NPI8 374 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 MAGEL2Q9UJ55 1249 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 PSME4Q14997 1843 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TBC1D3BA6NDS4 549 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 A8MT66 165 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 SGTAO43765 313 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 CNTN5O94779 1100 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 KCNH1O95259 989 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 CARD16Q5EG05 197 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 FAM151BQ6UXP7 276 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 SLC2A11Q9BYW1 496 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 MIR1-1HGQ9H1L0 117 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 MAGEE1Q9HCI5 957 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 USE1Q9NZ43 259 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 AP4S1Q9Y587 144 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 SOBPA7XYQ1 873 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 EIF3FO00303 357 aaPredicted RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TIPRLO75663 272 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 SLC22A3O75751 556 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TLX1P31314 330 aaPredicted RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 RABGGTBP53611 331 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 ACTR3P61158 418 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 TEAD4Q15561 434 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 ZNHIT3Q15649 155 aaPredicted RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 DLG2Q15700 870 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 CCDC142Q17RM4 750 aa7.54□□□□□ -1.2
HIPK1-201ENST00000340480 LSM12Q3MHD2 195 aaKnown RBP7.54□□□□□ -1.2
HIPK1-201ENST00000340480 RTP2Q5QGT7 225 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms