RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 OXTRP30559 389 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 YAP1P46937 504 aaKnown RBP18.63■□□□□ 0.57
PSPC1-201ENST00000338910 POLD2P49005 469 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 EIF2B2P49770 351 aaKnown RBP18.63■□□□□ 0.57
PSPC1-201ENST00000338910 MLLT10P55197 1068 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 ITGADQ13349 1161 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 CUZD1Q86UP6 607 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 IGFN1Q86VF2 1251 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 LGI2Q8N0V4 545 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 PGBD5Q8N414 524 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 AFAP1L2Q8N4X5 818 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 PNPT1Q8TCS8 783 aaKnown RBP18.63■□□□□ 0.57
PSPC1-201ENST00000338910 HEXDCQ8WVB3 486 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 LRCH3Q96II8 777 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 NANOGQ9H9S0 305 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 SMPD3Q9NY59 655 aaPredicted RBP18.63■□□□□ 0.57
PSPC1-201ENST00000338910 MTRRQ9UBK8 725 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 DOCK4Q8N1I0 1966 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 CLPXO76031 633 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 BCL10O95999 233 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 TACR2P21452 398 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 ITGB8P26012 769 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 MAPK10P53779 464 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 RING1Q06587 406 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 UGP2Q16851 508 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 CYHR1Q6ZMK1 362 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 CNTN4Q8IWV2 1026 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 PCYOX1LQ8NBM8 494 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 PDPRQ8NCN5 879 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 C2orf15Q8WU43 125 aaKnown RBP18.63■□□□□ 0.57
PSPC1-201ENST00000338910 HDAC10Q969S8 669 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 EGFL7Q9UHF1 273 aa18.63■□□□□ 0.57
PSPC1-201ENST00000338910 C1orf232A0A0U1RR37 186 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 GJB5O95377 273 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 MMP2P08253 660 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 GSTT2P0CG29 244 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 GSTT2BP0CG30 244 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 HSD17B1P14061 328 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 ATP5C1P36542 298 aaKnown RBP18.62■□□□□ 0.57
PSPC1-201ENST00000338910 SERINC3Q13530 473 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 CCNYL2Q5T2Q4 361 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 PNPLA1Q8N8W4 532 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 TREX1Q9NSU2 369 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 WBP1LQ9NX94 342 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 PKD2L2Q9NZM6 624 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 MAP10Q9P2G4 905 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 IFT80Q9P2H3 777 aaPredicted RBP18.62■□□□□ 0.57
PSPC1-201ENST00000338910 SEC14L2O76054 403 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 CLTBP09497 229 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 JUNBP17275 347 aaPredicted RBP18.62■□□□□ 0.57
PSPC1-201ENST00000338910 KCNA5P22460 613 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 SLC1A2P43004 574 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 ATP4BP51164 291 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 ZNF362Q5T0B9 420 aaPredicted RBP18.62■□□□□ 0.57
PSPC1-201ENST00000338910 ZNF470Q6ECI4 717 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 LARP4Q71RC2 724 aaKnown RBP eCLIP18.62■□□□□ 0.57
PSPC1-201ENST00000338910 RPS27LQ71UM5 84 aaKnown RBP18.62■□□□□ 0.57
PSPC1-201ENST00000338910 CCDC117Q8IWD4 279 aaPredicted RBP18.62■□□□□ 0.57
PSPC1-201ENST00000338910 DDIASQ8IXT1 998 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 SCAIQ8N9R8 606 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 TRPV3Q8NET8 790 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 OLFM1Q99784 485 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 CLSTN3Q9BQT9 956 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 EML4Q9HC35 981 aaKnown RBP18.62■□□□□ 0.57
PSPC1-201ENST00000338910 COMMD8Q9NX08 183 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 GIN1Q9NXP7 522 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 ACTR3BQ9P1U1 418 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 UXTQ9UBK9 157 aaPredicted RBP18.62■□□□□ 0.57
PSPC1-201ENST00000338910 SEPT3Q9UH03 358 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 DNMT3LQ9UJW3 386 aa18.62■□□□□ 0.57
PSPC1-201ENST00000338910 GPC6Q9Y625 555 aaPredicted RBP18.62■□□□□ 0.57
PSPC1-201ENST00000338910 A0A0D9SEW6 157 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 KRBA1A5PL33 1030 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 GPX3P22352 226 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 JAK1P23458 1154 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 SLC6A4P31645 630 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 GJA8P48165 433 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 SERPINH1P50454 418 aaKnown RBP18.61■□□□□ 0.57
PSPC1-201ENST00000338910 TAS2R39P59534 338 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 DEFB103AP81534 67 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 BNIP2Q12982 314 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 OXA1LQ15070 435 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 ZNF773Q6PK81 442 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 PTCD2Q8WV60 388 aaKnown RBP18.61■□□□□ 0.57
PSPC1-201ENST00000338910 TAMM41Q96BW9 452 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 PAWRQ96IZ0 340 aaKnown RBP18.61■□□□□ 0.57
PSPC1-201ENST00000338910 HOPXQ9BPY8 73 aaPredicted RBP18.61■□□□□ 0.57
PSPC1-201ENST00000338910 SOX17Q9H6I2 414 aaPredicted RBP18.61■□□□□ 0.57
PSPC1-201ENST00000338910 GPN2Q9H9Y4 310 aaPredicted RBP18.61■□□□□ 0.57
PSPC1-201ENST00000338910 FBRSL1Q9HCM7 1045 aaKnown RBP18.61■□□□□ 0.57
PSPC1-201ENST00000338910 CYP4F12Q9HCS2 524 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 ATAD3AQ9NVI7 634 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 BBIP1A8MTZ0 92 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 F5H5T6 163 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 CNOT3O75175 753 aaKnown RBP18.61■□□□□ 0.57
PSPC1-201ENST00000338910 SEC24AO95486 1093 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 MBL2P11226 248 aaPredicted RBP18.61■□□□□ 0.57
PSPC1-201ENST00000338910 CSF2RAP15509 400 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 PAMP19021 973 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 IL10RBQ08334 325 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms