RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 VPS35Q96QK1 796 aa14.59□□□□□ -0.07
CDK5RAP3-201ENST00000338399 FAM107BQ9H098 131 aa14.59□□□□□ -0.07
CDK5RAP3-201ENST00000338399 MANSC1Q9H8J5 431 aa14.59□□□□□ -0.07
CDK5RAP3-201ENST00000338399 SYTL2Q9HCH5 934 aa14.59□□□□□ -0.07
CDK5RAP3-201ENST00000338399 THEGQ9P2T0 379 aa14.59□□□□□ -0.07
CDK5RAP3-201ENST00000338399 COPG2Q9UBF2 871 aa14.59□□□□□ -0.07
CDK5RAP3-201ENST00000338399 XPR1Q9UBH6 696 aa14.59□□□□□ -0.07
CDK5RAP3-201ENST00000338399 WNT16Q9UBV4 365 aa14.59□□□□□ -0.07
CDK5RAP3-201ENST00000338399 PRR23AA6NEV1 266 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 H3BMM5 538 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 BIRC5O15392 142 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PLRG1O43660 514 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SLC25A14O95258 325 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SOD1P00441 154 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 APOA4P06727 396 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SBK3P0C264 359 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CPA3P15088 417 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 MSH3P20585 1137 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ALDH3A1P30838 453 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SKIV2L2P42285 1042 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 GPR1P46091 355 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CLCN7P51798 805 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KPNA2P52292 529 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 DPTQ07507 201 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 UBXN2BQ14CS0 331 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KHDC1Q4VXA5 237 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SEL1L3Q68CR1 1132 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RAET1GQ6H3X3 334 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 UGT3A1Q6NUS8 523 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KLC3Q6P597 504 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 FAM124AQ86V42 546 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 C10orf107Q8IVU9 208 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 DDHD1Q8NEL9 900 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 DCUN1D1Q96GG9 259 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CD93Q9NPY3 652 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 MBD1Q9UIS9 605 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ZFR2Q9UPR6 939 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 NCKAP1Q9Y2A7 1128 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 DHRS7Q9Y394 339 aa14.58□□□□□ -0.08
CDK5RAP3-201ENST00000338399 COL6A3P12111 3177 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 C19orf67A6NJJ6 358 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 G3V2L1 256 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ATP1B2P14415 290 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CD1DP15813 335 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 GABRG2P18507 467 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TFEBP19484 476 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ADPRHP54922 357 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ACAP2Q15057 778 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 LDLRAP1Q5SW96 308 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RGS9BPQ6ZS82 235 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 MRPL57Q9BQC6 102 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 OSBPL6Q9BZF3 934 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SIRPGQ9P1W8 387 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CNOT6Q9ULM6 557 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 MRPS17Q9Y2R5 130 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KANSL1LA0AUZ9 987 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CFAP99D6REC4 459 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ZBTB14O43829 449 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 OR56A5P0C7T3 313 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RALBP11234 206 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 STARD6P59095 220 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 LRRC32Q14392 662 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CHI3L2Q15782 390 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TECRLQ5HYJ1 363 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 FAM47EQ6ZV65 393 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 USP30Q70CQ3 517 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KBTBD6Q86V97 674 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 NLRP8Q86W28 1048 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CPNE9Q8IYJ1 553 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SIX5Q8N196 739 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 NKAPQ8N5F7 415 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PLA2G15Q8NCC3 412 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 BCAS4Q8TDM0 211 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 EEF1AKMT1Q8WVE0 214 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 HMGB4Q8WW32 186 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KLK6Q92876 244 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SGF29Q96ES7 293 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SHDQ96IW2 340 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CCT8L2Q96SF2 557 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 FOXQ1Q9C009 403 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 MRPL46Q9H2W6 279 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 LTB4R2Q9NPC1 389 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 FZD4Q9ULV1 537 aa14.57□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D3DA0A087WVF3 549 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D3IA0A087WXS9 549 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D3EA0A087X179 549 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D3KA0A087X1G2 549 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D3FA6NER0 549 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 FAM170BA6NMN3 283 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TARM1B6A8C7 271 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D3LB9A6J9 549 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RNGTTO60942 597 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RBP1P09455 135 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D3HP0C7X1 549 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 C7P10643 843 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 MYL2P10916 166 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 DRD4P21917 467 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 IL2P60568 153 aa14.56□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RPS21P63220 83 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms