RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 HERVK_113P63132 956 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 TTC9BQ8N6N2 239 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ERVK-6Q9BXR3 956 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 NUSAP1Q9BXS6 441 aaKnown RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ATG10Q9H0Y0 220 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 VPS51Q9UID3 782 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CDC7O00311 574 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 OOSP2Q86WS3 158 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 MOCOSQ96EN8 888 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 C2orf78A6NCI8 922 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF840PA6NDX5 716 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 GSNP06396 782 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 GMPRP36959 345 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 STC1P52823 247 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 NUP107P57740 925 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CNTN1Q12860 1018 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 REP15Q6BDI9 236 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 GLYATQ6IB77 296 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 GCNT7Q6ZNI0 430 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CHPFQ8IZ52 775 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 PANX1Q96RD7 426 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 AKTIPQ9H8T0 292 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CLDN9O95484 217 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ANXA6P08133 673 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ACADMP11310 421 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 UQCRBP14927 111 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ETV4P43268 484 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 APLP1P51693 650 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 TP53BP2Q13625 1128 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 PLEKHG4Q58EX7 1191 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 DCAF4L2Q8NA75 395 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ATAD5Q96QE3 1844 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 INPPL1O15357 1258 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 FFAR2O15552 330 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 PSMA3P25788 255 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 DGKGP49619 791 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 PSMD7P51665 324 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 NRG1Q02297 640 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CARD16Q5EG05 197 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CEP97Q8IW35 865 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 OR2T12Q8NG77 320 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 OR8D1Q8WZ84 308 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 KLHL32Q96NJ5 620 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 TDP1Q9NUW8 608 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 MARCH4Q9P2E8 410 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-202ENST00000338368 DOLKQ9UPQ8 538 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 DDX60Q8IY21 1712 aaKnown RBP6.23□□□□□ -1.41
PRKDC-202ENST00000338368 LEPRP48357 1165 aaKnown RBP6.23□□□□□ -1.41
PRKDC-202ENST00000338368 FOLH1Q04609 750 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CGB2Q6NT52 195 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 EID3Q8N140 333 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CLDN19Q8N6F1 224 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 PAWRQ96IZ0 340 aaKnown RBP6.23□□□□□ -1.41
PRKDC-202ENST00000338368 TRAPPC9Q96Q05 1148 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 OR52E6Q96RD3 313 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 NDEL1Q9GZM8 345 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 BACE2Q9Y5Z0 518 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 AP4B1Q9Y6B7 739 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 K7EPI3 171 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 IGFBP6P24592 240 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-202ENST00000338368 FAM46CQ5VWP2 391 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 SPESP1Q6UW49 350 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 TPRG1Q6ZUI0 275 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 PNPLA1Q8N8W4 532 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 OR9Q1Q8NGQ5 310 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CSGALNACT1Q8TDX6 532 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 MRM3Q9HC36 420 aaKnown RBP6.23□□□□□ -1.41
PRKDC-202ENST00000338368 LIPEQ05469 1076 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CHRNA6Q15825 494 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 GPR141Q7Z602 305 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 PYCR2Q96C36 320 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 RWDD3Q9Y3V2 267 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 INSL6Q9Y581 213 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ADH1CP00326 375 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 AOC1P19801 751 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 WASP42768 502 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CHIT1Q13231 466 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 PLCL1Q15111 1095 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 LRRC73Q5JTD7 316 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 EPGNQ6UW88 154 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.23□□□□□ -1.412e-7■■■■■ 36.7
PRKDC-202ENST00000338368 CCDC81Q6ZN84 652 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 KCNJ9Q92806 393 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ZIC5Q96T25 663 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 MAPRE3Q9UPY8 281 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 NCKAP1Q9Y2A7 1128 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ECI2O75521 394 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 TIPRLO75663 272 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 NFATC1O95644 943 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 IFNA14P01570 189 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 CHN2P52757 468 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 DSC3Q14574 896 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 TGFBIQ15582 683 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 SPRED3Q2MJR0 410 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 TECRLQ5HYJ1 363 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 C16orf87Q6PH81 154 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 ARHGAP12Q8IWW6 846 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 FEM1AQ9BSK4 669 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 PCDH12Q9NPG4 1184 aa6.23□□□□□ -1.41
PRKDC-202ENST00000338368 TMCC3Q9ULS5 477 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms