RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 VARS2Q5ST30 1063 aaKnown RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 PTGFRNQ9P2B2 879 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 YDJCA8MPS7 323 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 FPGTO14772 594 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 PRPS2P11908 318 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 PSMA1P25786 263 aaKnown RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 MPIP34949 423 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 SLC5A3P53794 718 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 TRIM25Q14258 630 aaKnown RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 CFAP206Q8IYR0 622 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 LINC00471Q8N535 108 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 LCN9Q8WX39 176 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 DNAJC19Q96DA6 116 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 SNX15Q9NRS6 342 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 APC2O95996 2303 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 LRRC37A3O60309 1634 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 ESR1P03372 595 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 CNKSR3Q6P9H4 555 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 B3GNT6Q6ZMB0 384 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 BTN2A1Q7KYR7 527 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 SH3RF1Q7Z6J0 888 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 AMZ2Q86W34 360 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 OR4C6Q8NH72 309 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 PNPLA2Q96AD5 504 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 HIST1H2AAQ96QV6 131 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 COMMD4Q9H0A8 199 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 C19orf25Q9UFG5 118 aaPredicted RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 ERFP50548 548 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 RIPPLY1Q0D2K3 151 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 CCDC54Q8NEL0 328 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 HM13Q8TCT9 377 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 PRCCQ92733 491 aaPredicted RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 FAM83DQ9H4H8 585 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 ING4Q9UNL4 249 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 COG5Q9UP83 839 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 SPIN1Q9Y657 262 aaPredicted RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 ZNF536O15090 1300 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 CCL16O15467 120 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 TNFP01375 233 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 MNDAP41218 407 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 CRELD2Q6UXH1 353 aaPredicted RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 CACUL1Q86Y37 369 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 TRPM4Q8TD43 1214 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 GPER1Q99527 375 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 SMAD5Q99717 465 aaKnown RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 CCM2Q9BSQ5 444 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 ZNF282Q9UDV7 671 aaPredicted RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 ZNF490Q9ULM2 529 aaPredicted RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 LOC100506127A0A0U1RQW1 187 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 ANKRD65E5RJM6 399 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 SLC1A5Q15758 541 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 PARGQ86W56 976 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 C11orf65Q8NCR3 313 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 GPR156Q8NFN8 814 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 ART4Q93070 314 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 ZNF717Q9BY31 904 aaPredicted RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 CILPO75339 1184 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 SOX30O94993 753 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 ENDOUP21128 410 aaKnown RBP12.17□□□□□ -0.46
FN1-202ENST00000336916 PPP3R1P63098 170 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 FMO1Q01740 532 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 TRIM32Q13049 653 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 ZSWIM7Q19AV6 140 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 PTCHD4Q6ZW05 846 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 HEPHQ9BQS7 1158 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 SERINC1Q9NRX5 453 aa12.17□□□□□ -0.46
FN1-202ENST00000336916 CICQ96RK0 1608 aaPredicted RBP12.16□□□□□ -0.46
FN1-202ENST00000336916 A8MX80 341 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 TMEM150CB9EJG8 249 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 MATN3O15232 486 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 PDCD4Q53EL6 469 aaKnown RBP12.16□□□□□ -0.46
FN1-202ENST00000336916 C12orf29Q8N999 325 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 LPPQ93052 612 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 OSBPL2Q9H1P3 480 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 C11orf49Q9H6J7 331 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 KLHL33A6NCF5 533 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 KCNU1A8MYU2 1149 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 CDK14O94921 469 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 ATP6V1G2O95670 118 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 IFNA6P05013 189 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 LILRA4P59901 499 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 CAP1Q01518 475 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 RIPK1Q13546 671 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 GCNT6Q5T4J0 391 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 DNASE1L2Q92874 299 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 TAPBPLQ9BX59 468 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 ANKRD63C9JTQ0 380 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 FAM98AQ8NCA5 519 aaKnown RBP12.16□□□□□ -0.46
FN1-202ENST00000336916 C12orf42Q96LP6 360 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 SLC24A3Q9HC58 644 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 PCCBP05166 539 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 CD2P06729 351 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 KCNA5P22460 613 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 KHKP50053 298 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 ZNF311Q5JNZ3 666 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 CES3Q6UWW8 571 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 ARHGAP36Q6ZRI8 547 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 UXS1Q8NBZ7 420 aa12.16□□□□□ -0.46
FN1-202ENST00000336916 RAD51AP1Q96B01 352 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms