RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 HNF1BP35680 557 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 KPNA1P52294 538 aaPredicted RBP8.76□□□□□ -1.01
SNCA-201ENST00000336904 ERVPABLB-1P60509 514 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 IL2P60568 153 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 NTHL1P78549 312 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 MED21Q13503 144 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 COL9A2Q14055 689 aaPredicted RBP8.76□□□□□ -1.01
SNCA-201ENST00000336904 TGFBIQ15582 683 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 MAP7D1Q3KQU3 841 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 ANKS6Q68DC2 871 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 CHSY3Q70JA7 882 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 AFAP1L2Q8N4X5 818 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 FNDC5Q8NAU1 212 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 CANT1Q8WVQ1 401 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 DLG3Q92796 817 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 KIAA1191Q96A73 305 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 PYCR2Q96C36 320 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 SOX17Q9H6I2 414 aaPredicted RBP8.76□□□□□ -1.01
SNCA-201ENST00000336904 ZDHHC6Q9H6R6 413 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 ZFP14Q9HCL3 533 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 BATF3Q9NR55 127 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 LATS2Q9NRM7 1088 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 INTS7Q9NVH2 962 aaKnown RBP8.76□□□□□ -1.01
SNCA-201ENST00000336904 GEMIN8Q9NWZ8 242 aaKnown RBP8.76□□□□□ -1.01
SNCA-201ENST00000336904 FNIP2Q9P278 1114 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 INTS6Q9UL03 887 aaKnown RBP8.76□□□□□ -1.01
SNCA-201ENST00000336904 PSMD13Q9UNM6 376 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 TBC1D30Q9Y2I9 924 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 MICAL3Q7RTP6 2002 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 ANTXRLA6NF34 631 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 NPIPB15A6NHN6 443 aaPredicted RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 ANGPT2O15123 496 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 SLC25A14O95258 325 aaPredicted RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 CLIC3O95833 236 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 CAPN1P07384 714 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 XIAPP98170 497 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 HMGCS1Q01581 520 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 LCP2Q13094 533 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PDK3Q15120 406 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 CHRNA6Q15825 494 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 C6orf10Q5SRN2 563 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 AAGABQ6PD74 315 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 SLC2A7Q6PXP3 512 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 IL27RAQ6UWB1 636 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 SATL1Q86VE3 508 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 ING5Q8WYH8 240 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 JADE3Q92613 823 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 EME1Q96AY2 570 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 SLCO4A1Q96BD0 722 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PLD4Q96BZ4 506 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 SLC29A1Q99808 456 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 TMEM175Q9BSA9 504 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 IL21Q9HBE4 155 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 RIMS3Q9UJD0 308 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 CROTQ9UKG9 612 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PCTPQ9UKL6 214 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PLXNA4Q9HCM2 1894 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 TRIM38O00635 465 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 HOXA2O43364 376 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 AKAP10O43572 662 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 EPOP01588 193 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 UQCRBP14927 111 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 OGNP20774 298 aaKnown RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 POLD2P49005 469 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 EPHB3P54753 998 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 ADGRE1Q14246 886 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 MILR1Q7Z6M3 343 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 HERC6Q8IVU3 1022 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 SLC39A11Q8N1S5 342 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 BEND7Q8N7W2 519 aaPredicted RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 GPR150Q8NGU9 434 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 ZNF599Q96NL3 588 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 BEGAINQ9BUH8 593 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 COQ10BQ9H8M1 238 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 ZFYVE1Q9HBF4 777 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 SPAG4Q9NPE6 437 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 IL26Q9NPH9 171 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 MRPL17Q9NRX2 175 aaKnown RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 ELOVL2Q9NXB9 296 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 IL17CQ9P0M4 197 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PRPF19Q9UMS4 504 aaKnown RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 SH3BP1Q9Y3L3 701 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 AP4B1Q9Y6B7 739 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 CROCCQ5TZA2 2017 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 C15orf38-AP3S2A0A0A6YYH1 394 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 LCHNA4D1U4 455 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 MAGEA13PA6NCF6 341 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 ASPDHA6ND91 283 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 HIDE1A8MVS5 230 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 NEDD8-MDP1E9PL57 170 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PLOD2O00469 737 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 AXIN1O15169 862 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 GREM1O60565 184 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 BCAS2O75934 225 aaPredicted RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 RSL1D1O76021 490 aaKnown RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 UGT2B4P06133 528 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 BPIP17213 487 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 IL12AP29459 219 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PPP1R8Q12972 351 aaKnown RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 STX5Q13190 355 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms