RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 PSMD11O00231 422 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 CDC7O00311 574 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 SDHDO14521 159 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 GSC2O15499 205 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 UGT1A6P19224 532 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 CHRM3P20309 590 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 UGT1A1P22309 533 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 UGT1A4P22310 534 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 UGT1A3P35503 534 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 UGT1A5P35504 534 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 PLA2G5P39877 138 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 EIF2DP41214 584 aaKnown RBP13.34□□□□□ -0.27
LMO1-201ENST00000335790 ST8SIA6P61647 398 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 HYAL1Q12794 435 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 RALGDSQ12967 914 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 GBX1Q14549 363 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 HNRNPA1L2Q32P51 320 aaKnown RBP13.34□□□□□ -0.27
LMO1-201ENST00000335790 LSM12Q3MHD2 195 aaKnown RBP13.34□□□□□ -0.27
LMO1-201ENST00000335790 UGT3A2Q3SY77 523 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 ARSIQ5FYB1 569 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 GPRC6AQ5T6X5 926 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 PTRHD1Q6GMV3 140 aaKnown RBP13.34□□□□□ -0.27
LMO1-201ENST00000335790 VITQ6UXI7 678 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 ADAMTSL2Q86TH1 951 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 TMPRSS6Q8IU80 811 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 SUGP1Q8IWZ8 645 aaKnown RBP13.34□□□□□ -0.27
LMO1-201ENST00000335790 CPNE9Q8IYJ1 553 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 PAF1Q8N7H5 531 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 TMIEQ8NEW7 156 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 SORCS1Q8WY21 1168 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 LINGO1Q96FE5 620 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 MIPEPQ99797 713 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 BOCQ9BWV1 1114 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 CIPCQ9C0C6 399 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 EBF3Q9H4W6 596 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 NSUN3Q9H649 340 aaKnown RBP13.34□□□□□ -0.27
LMO1-201ENST00000335790 MEAF6Q9HAF1 191 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 ACSS2Q9NR19 701 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 NUDT4Q9NZJ9 180 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 CDYLQ9Y232 598 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 PRSS21Q9Y6M0 314 aa13.34□□□□□ -0.27
LMO1-201ENST00000335790 TRANK1O15050 2925 aa13.33□□□□□ -0.27
LMO1-201ENST00000335790 EDDM13A0A1B0GTR0 161 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 OTOL1A6NHN0 477 aaPredicted RBP13.33□□□□□ -0.28
LMO1-201ENST00000335790 SPECC1L-ADORA2AF8WAN1 911 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 BTN3A1O00481 513 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 UBFD1O14562 309 aaKnown RBP13.33□□□□□ -0.28
LMO1-201ENST00000335790 BNIP3LO60238 219 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 WFS1O76024 890 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 SUPT7LO94864 414 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CDK14O94921 469 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 PRNPP04156 253 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CBSLP0DN79 551 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 HNRNPLP14866 589 aaKnown RBP eCLIP13.33□□□□□ -0.28
LMO1-201ENST00000335790 DGKAP23743 735 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CBSP35520 551 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 SLC6A11P48066 632 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 RGS4P49798 205 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 MNAT1P51948 309 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CDC16Q13042 620 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 KLF10Q13118 480 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 ARHGEF7Q14155 803 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 UBAP2LQ14157 1087 aaKnown RBP13.33□□□□□ -0.28
LMO1-201ENST00000335790 NAA25Q14CX7 972 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 TTC31Q49AM3 519 aaPredicted RBP13.33□□□□□ -0.28
LMO1-201ENST00000335790 ATP13A5Q4VNC0 1218 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 ANKS6Q68DC2 871 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 TANGO2Q6ICL3 276 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 RINLQ6ZS11 566 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CHSY3Q70JA7 882 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 GET4Q7L5D6 327 aaPredicted RBP13.33□□□□□ -0.28
LMO1-201ENST00000335790 TECPR1Q7Z6L1 1165 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CLYBLQ8N0X4 340 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 PELI3Q8N2H9 469 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 FBXO39Q8N4B4 442 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CPA6Q8N4T0 437 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 TEX9Q8N6V9 391 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CEP70Q8NHQ1 597 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 ZNF483Q8TF39 744 aaPredicted RBP13.33□□□□□ -0.28
LMO1-201ENST00000335790 NXPE3Q969Y0 559 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CCDC97Q96F63 343 aaPredicted RBP13.33□□□□□ -0.28
LMO1-201ENST00000335790 COPS8Q99627 209 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CADM1Q9BY67 442 aaKnown RBP13.33□□□□□ -0.28
LMO1-201ENST00000335790 NUF2Q9BZD4 464 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 TMEM245Q9H330 911 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 ZFP14Q9HCL3 533 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 TNFRSF12AQ9NP84 129 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 PCDH12Q9NPG4 1184 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 SPATS2LQ9NUQ6 558 aaKnown RBP13.33□□□□□ -0.28
LMO1-201ENST00000335790 TMPRSS11EQ9UL52 423 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 FNDC3AQ9Y2H6 1198 aaKnown RBP13.33□□□□□ -0.28
LMO1-201ENST00000335790 TRAF6Q9Y4K3 522 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 LRRK1Q38SD2 2015 aa13.33□□□□□ -0.28
LMO1-201ENST00000335790 CDH23Q9H251 3354 aa13.32□□□□□ -0.28
LMO1-201ENST00000335790 NPEPPSL1A6NEC2 478 aa13.32□□□□□ -0.28
LMO1-201ENST00000335790 C16orf96A6NNT2 1141 aa13.32□□□□□ -0.28
LMO1-201ENST00000335790 IQCF5A8MTL0 148 aa13.32□□□□□ -0.28
LMO1-201ENST00000335790 H0Y858 1186 aa13.32□□□□□ -0.28
LMO1-201ENST00000335790 MAGEC1O60732 1142 aa13.32□□□□□ -0.28
LMO1-201ENST00000335790 JUNP05412 331 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms