RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IPO13O94829 963 aaKnown RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 RLN2P04090 185 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ACADVLP49748 655 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 GJA9P57773 515 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 FAM71AQ8IYT1 594 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 GPRC5AQ8NFJ5 357 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 OR10H5Q8NGA6 315 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 OR4L1Q8NH43 312 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 HDAC10Q969S8 669 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 NECTIN3Q9NQS3 549 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 CPA4Q9UI42 421 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 PHF24Q9UPV7 400 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 MAP4K5Q9Y4K4 846 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF780BQ9Y6R6 833 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 GATBO75879 557 aaKnown RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 BDNFP23560 247 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 MAGEA8P43361 318 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ADAM8P78325 824 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 UAP1L1Q3KQV9 507 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 TOR1AIP1Q5JTV8 583 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 CERCAMQ5T4B2 595 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 LYPLAL1Q5VWZ2 237 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF782Q6ZMW2 699 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF781Q8N8C0 355 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ACER1Q8TDN7 264 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 AARSD1Q9BTE6 412 aaKnown RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 TRMOQ9BU70 441 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 GTPBP2Q9BX10 602 aaKnown RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF471Q9BX82 626 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF717Q9BY31 904 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 PRDM12Q9H4Q4 367 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 TAS2R1Q9NYW7 299 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 SPATA7Q9P0W8 599 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 EML1O00423 815 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 SCELO95171 688 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 GIMD1P0DJR0 217 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 RBM34P42696 430 aaKnown RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 NFIAQ12857 509 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 NAE1Q13564 534 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 RNASEH2BQ5TBB1 312 aaKnown RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF670Q9BS34 389 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 BRD9Q9H8M2 597 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 TRPM1Q7Z4N2 1603 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 RIIAD1A6NNX1 92 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 C12orf71A8MTZ7 269 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 C2P06681 752 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 STOMP27105 288 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 SLC6A4P31645 630 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ACSL1P33121 698 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 CLK3P49761 638 aaKnown RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 NFE2Q16621 373 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 FAM91A1Q658Y4 838 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 RAP1GAP2Q684P5 730 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ADGRD1Q6QNK2 874 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 QSOX2Q6ZRP7 698 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 SETD6Q8TBK2 473 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 TRPM4Q8TD43 1214 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 MAFIPQ8WZ33 124 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 TLCD1Q96CP7 247 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 AP1S3Q96PC3 154 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 GAD1Q99259 594 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 SLC39A8Q9C0K1 460 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 SGK2Q9HBY8 427 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 PCDH10Q9P2E7 1040 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 SPATA31A6Q5VVP1 1343 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 A2ML1A8K2U0 1454 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ILVBLA1L0T0 632 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ANXA2P2A6NMY6 339 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ANXA2P07355 339 aaKnown RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ADRB2P07550 413 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF286BP0CG31 522 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 GMPSP49915 693 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 SKP1P63208 163 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 CBLBQ13191 982 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 NPTX1Q15818 432 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 FAM83AQ86UY5 434 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 MAP4K3Q8IVH8 894 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 CYP2W1Q8TAV3 490 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ALG3Q92685 438 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ROPN1LQ96C74 230 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 NSMCE3Q96MG7 304 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 DCSTAMPQ9H295 470 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 LIN28AQ9H9Z2 209 aaKnown RBP9.73□□□□□ -0.85
COL4A6-201ENST00000334504 TRPV4Q9HBA0 871 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 EQTNQ9NQ60 294 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 ABCC13Q9NSE7 274 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 HSPB11Q9Y547 144 aa9.73□□□□□ -0.85
COL4A6-201ENST00000334504 PLA2R1Q13018 1463 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 L7N2F9 121 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 AURKAO14965 403 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 HCN1O60741 890 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 MAXP61244 160 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 RPL7AP62424 266 aaKnown RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 POLR2LP62875 67 aaKnown RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 PLEKHG6Q3KR16 790 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 HECTD2Q5U5R9 776 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 PHF13Q86YI8 300 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-201ENST00000334504 CFAP206Q8IYR0 622 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 OR5K1Q8NHB7 308 aa9.72□□□□□ -0.85
COL4A6-201ENST00000334504 APOLD1Q96LR9 279 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms