RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TKTL1P51854 596 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 EEFSECP57772 596 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 AHSA2Q719I0 299 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ECHDC2Q86YB7 292 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SLC5A5Q92911 643 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TIFAQ96CG3 184 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 C1GALT1C1Q96EU7 318 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 MRPL9Q9BYD2 267 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 FN3KQ9H479 309 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 EBF3Q9H4W6 596 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ATP13A1Q9HD20 1204 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 RBM22Q9NW64 420 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 PTTG3PQ9NZH4 202 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ZMYM5Q9UJ78 669 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SH3D21A4FU49 640 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TRAPPC13A5PLN9 417 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 IFI30P13284 250 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 DNAJA1P31689 397 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 GDI2P50395 445 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ATXN7L2Q5T6C5 722 aaPredicted RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 UBR7Q8N806 425 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SMG8Q8ND04 991 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 VRK1Q99986 396 aaPredicted RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF282Q9UDV7 671 aaPredicted RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SIX4Q9UIU6 781 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CNOT6Q9ULM6 557 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 REXO2Q9Y3B8 237 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF780BQ9Y6R6 833 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 FSCN2O14926 492 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ARL6IP5O75915 188 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 IFNA17P01571 189 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CYP3A4P08684 503 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CYP4B1P13584 511 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TBX4P57082 545 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TROAPQ12815 778 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 C6orf183Q5T699 404 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TSPAN33Q86UF1 283 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ANKRD13BQ86YJ7 626 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 RNF148Q8N7C7 305 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 MSANTD3Q96H12 275 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 BTF3L4Q96K17 158 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 APBA2Q99767 749 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SPATA9Q9BWV2 254 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TRPV4Q9HBA0 871 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TMEM184CQ9NVA4 438 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TMEM5Q9Y2B1 443 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 KCNE2Q9Y6J6 123 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 BORCS7-ASMTA0A0B4J1R7 106 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 A0A1B0GVI7 797 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 OR6C70A6NIJ9 312 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 DISC1C4P0D8 188 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 LTFP02788 710 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TRIM23P36406 574 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 MAPK10P53779 464 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SEPT12Q8IYM1 358 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 JPH3Q8WXH2 748 aaPredicted RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ERLEC1Q96DZ1 483 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 OR51E2Q9H255 320 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF696Q9H7X3 374 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ZFP57Q9NU63 452 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SLC39A1Q9NY26 324 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 KLQ9UEF7 1012 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 IFT172Q9UG01 1749 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 A0A1W2PQ67 120 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 LRRN3E7EW58 273 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 L7N2F9 121 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ETV6P41212 452 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ATP4BP51164 291 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 POU5F1Q01860 360 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TATDN1Q6P1N9 297 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF730Q6ZMV8 503 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 OXR1Q8N573 874 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 WDR48Q8TAF3 677 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF606Q8WXB4 792 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CLP1Q92989 425 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CRAMP1Q96RY5 1269 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SMAD5Q99717 465 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 C2orf49Q9BVC5 232 aaPredicted RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 LRRN3Q9H3W5 708 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SEC14L3Q9UDX4 400 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TMX2Q9Y320 296 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CLTCQ00610 1675 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 MYO5BQ9ULV0 1848 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 PRAMEF12O95522 483 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 HLA-DPB1P04440 258 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 NOS2P35228 1153 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 GNPDA1P46926 289 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SMARCB1Q12824 385 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 KANK2Q63ZY3 851 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 LRRN1Q6UXK5 716 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ZC3H7AQ8IWR0 971 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ELMOD2Q8IZ81 293 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CENPSQ8N2Z9 138 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 FAM234BA2RU67 622 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 URODP06132 367 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TFEBP19484 476 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 DNASE1L1P49184 302 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CSTF1Q05048 431 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 GRSF1Q12849 480 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 RXFP2Q8WXD0 754 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms