RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 MTHFD1P11586 935 aaKnown RBP15.87■□□□□ 0.13
SYNM-201ENST00000328642 CKMT2P17540 419 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 SPAM1P38567 509 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 LCP2Q13094 533 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 TSPAN33Q86UF1 283 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 SMAD5Q99717 465 aaKnown RBP15.87■□□□□ 0.13
SYNM-201ENST00000328642 MFSD1Q9H3U5 465 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 S100A14Q9HCY8 104 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 DNAJC28Q9NX36 388 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 MTF2Q9Y483 593 aaPredicted RBP15.87■□□□□ 0.13
SYNM-201ENST00000328642 LRRC37AA6NMS7 1700 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 C5orf58C9J3I9 102 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 H0Y858 1186 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 SAP18O00422 153 aaKnown RBP15.87■□□□□ 0.13
SYNM-201ENST00000328642 SLC22A3O75751 556 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 CATP04040 527 aaKnown RBP15.87■□□□□ 0.13
SYNM-201ENST00000328642 ITGAXP20702 1163 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 SLC18A1P54219 525 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 MTPNP58546 118 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 TAF1AQ15573 450 aaPredicted RBP15.87■□□□□ 0.13
SYNM-201ENST00000328642 VPS37AQ8NEZ2 397 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 SHROOM3Q8TF72 1996 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 SKA1Q96BD8 255 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 PLD4Q96BZ4 506 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 CASD1Q96PB1 797 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 DCUN1D5Q9BTE7 237 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 BOCQ9BWV1 1114 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 ROGDIQ9GZN7 287 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 CSNK1G1Q9HCP0 422 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 EMCNQ9ULC0 261 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 SNX5Q9Y5X3 404 aa15.87■□□□□ 0.13
SYNM-201ENST00000328642 RGS14O43566 566 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 MAGEA11P43364 429 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 HIST2H2ACQ16777 129 aaPredicted RBP15.86■□□□□ 0.13
SYNM-201ENST00000328642 RAB41Q5JT25 222 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 C6orf52Q5T4I8 152 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 RNF220Q5VTB9 566 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 HIST2H2AA3Q6FI13 130 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 SDE2Q6IQ49 451 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 CNKSR3Q6P9H4 555 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 TMEM25Q86YD3 366 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 CATSPER1Q8NEC5 780 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 DYRK1BQ9Y463 629 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 A0A0G2JN53 185 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.86■□□□□ 0.13
SYNM-201ENST00000328642 TMEM247A6NEH6 219 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 TRAFD1O14545 582 aaPredicted RBP15.86■□□□□ 0.13
SYNM-201ENST00000328642 STK16O75716 305 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 MLYCDO95822 493 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 GABRB3P28472 473 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 CACNG1Q06432 222 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 NEDD8Q15843 81 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 SLC39A5Q6ZMH5 540 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 HORMAD1Q86X24 394 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 PIANPQ8IYJ0 282 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 C2CD4AQ8NCU7 369 aaPredicted RBP15.86■□□□□ 0.13
SYNM-201ENST00000328642 OR52E6Q96RD3 313 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 CLSTN3Q9BQT9 956 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 RTKNQ9BST9 563 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 ALG2Q9H553 416 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 LNPEPQ9UIQ6 1025 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 COQ6Q9Y2Z9 468 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 USP3Q9Y6I4 520 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 E7ENX8 843 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 TRIM38O00635 465 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 COX7A2P14406 83 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 SGSHP51688 502 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 ITFG1Q8TB96 612 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 TSEN34Q9BSV6 310 aaKnown RBP15.86■□□□□ 0.13
SYNM-201ENST00000328642 YIPF2Q9BWQ6 316 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 SYNDIG1Q9H7V2 258 aa15.86■□□□□ 0.13
SYNM-201ENST00000328642 DUS2Q9NX74 493 aaKnown RBP15.86■□□□□ 0.13
SYNM-201ENST00000328642 ARIH1Q9Y4X5 557 aaPredicted RBP15.86■□□□□ 0.13
SYNM-201ENST00000328642 HMX2A2RU54 273 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 GRM6O15303 877 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 S1PR4O95977 384 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 KLKB1P03952 638 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 CYP2A6P11509 494 aaPredicted RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 HOXD8P13378 290 aaPredicted RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 TYRP14679 529 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 HTR7P34969 479 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 STC1P52823 247 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 SGCGQ13326 291 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 LRRC66Q68CR7 880 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 DPY19L3Q6ZPD9 716 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 PQLC1Q8N2U9 271 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 TMEM74Q96NL1 305 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 PSKH2Q96QS6 385 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 MMADHCQ9H3L0 296 aaPredicted RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 MIEF1Q9NQG6 463 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 TRPC4Q9UBN4 977 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 PADI4Q9UM07 663 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 TNPO3Q9Y5L0 923 aaKnown RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 SIPA1L1O43166 1804 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 KNTC1P50748 2209 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 MATN2O00339 956 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 RNASEH1O60930 286 aaKnown RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 OTCP00480 354 aa15.85■□□□□ 0.13
SYNM-201ENST00000328642 PABPC1P11940 636 aaKnown RBP15.85■□□□□ 0.13
SYNM-201ENST00000328642 PTPN2P17706 415 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms