RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 MATKP42679 507 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 UFM1P61960 85 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 MTA1Q13330 715 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 GRM2Q14416 872 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 SNX17Q15036 470 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 CPSF6Q16630 551 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 FAM110CQ1W6H9 321 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 MARC1Q5VT66 337 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PKN3Q6P5Z2 889 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 HFE2Q6ZVN8 426 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 SLC26A9Q7LBE3 791 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ARMC8Q8IUR7 673 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 CHERPQ8IWX8 916 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 LGI2Q8N0V4 545 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 TBC1D15Q8TC07 691 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 SGCDQ92629 289 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 APOL4Q9BPW4 351 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 NTPCRQ9BSD7 190 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 TINF2Q9BSI4 451 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 NEK6Q9HC98 313 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 SLC9A8Q9Y2E8 581 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 GIT1Q9Y2X7 761 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PCDHB3Q9Y5E6 796 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 A0A1B0GUL6 1792 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 A0A1W2PQ72 361 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ZNF99A8MXY4 864 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 G3V2L1 256 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 STX7O15400 261 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PSIP1O75475 530 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 OR4F21O95013 312 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 MYCLP1P12525 358 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 MLNP12872 115 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 NOS2P35228 1153 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ADRA1BP35368 520 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 POLR2JP52435 117 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 EFEMP1Q12805 493 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 CSTF3Q12996 717 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 IL18R1Q13478 541 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 DAG1Q14118 895 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PTPRNQ16849 979 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 CACHD1Q5VU97 1274 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ZCCHC8Q6NZY4 707 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 Q6ZNX1 250 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 SVOPQ8N4V2 548 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 SMG8Q8ND04 991 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 STARD8Q92502 1023 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 BIRC7Q96CA5 298 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 CEP295NLQ96MC4 621 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 HOPXQ9BPY8 73 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 DCSTAMPQ9H295 470 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 WDR6Q9NNW5 1121 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 MOCS1Q9NZB8 636 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 IKZF3Q9UKT9 509 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 A0A087X1B8 175 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 NPEPPSL1A6NEC2 478 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 NME4O00746 187 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 TSPAN4O14817 238 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PSMD3O43242 534 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 RGS10O43665 173 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PLOD3O60568 738 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PRKD3O94806 890 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 CYBBP04839 570 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 EDN1P05305 212 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ZNF26P17031 533 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ATF4P18848 351 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PPP3CCP48454 512 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 OR2B6P58173 313 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 KCNAB2Q13303 367 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 TSNQ15631 228 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 FSCN1Q16658 493 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ANKRD26P1Q6NSI1 321 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 GALNT10Q86SR1 603 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 DNAJB3Q8WWF6 145 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 NCSTNQ92542 709 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 AURKBQ96GD4 344 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 BIRC8Q96P09 236 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 TMEM245Q9H330 911 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 TP63Q9H3D4 680 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 NXF3Q9H4D5 531 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 KRT84Q9NSB2 600 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 SLC38A7Q9NVC3 462 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 INTS7Q9NVH2 962 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 TMLHEQ9NVH6 421 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 SIX4Q9UIU6 781 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ERGIC3Q9Y282 383 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PTCH2Q9Y6C5 1203 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PLIN4Q96Q06 1357 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.46□□□□□ -1.21
CDHR3-201ENST00000317716 PRSS51A0A1B0GVH4 220 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 FAM72CH0Y354 149 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 H3BN98 237 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 ARVCFO00192 962 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 FAM189A1O60320 539 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 VPS26AO75436 327 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 SERPINB7O75635 380 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 IRF1P10914 325 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 IFNA8P32881 189 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 CLK3P49761 638 aaKnown RBP7.46□□□□□ -1.21
CDHR3-201ENST00000317716 ILF2Q12905 390 aaKnown RBP7.46□□□□□ -1.21
CDHR3-201ENST00000317716 SPCS2Q15005 226 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms