RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TUFMP49411 452 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 CD300CQ08708 224 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 SMARCB1Q12824 385 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 CYP51A1Q16850 503 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 IL31Q6EBC2 164 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 LCN8Q6JVE9 175 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 TRUB1Q8WWH5 349 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 C1orf74Q96LT6 269 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 SPG21Q9NZD8 308 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 GIMAP2Q9UG22 337 aa17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 AFF4Q9UHB7 1163 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-201ENST00000316097 HTR3EA5X5Y0 456 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ZNF840PA6NDX5 716 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 PRRG1O14668 218 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ARPC2O15144 300 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 INPP4BO15327 924 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 MTSS1O43312 755 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 COCHO43405 550 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 B4GAT1O43505 415 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 SNAP29O95721 258 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 IRF1P10914 325 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 MTHFD1P11586 935 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 RPS9P46781 194 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ARCN1P48444 511 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 TMED10P49755 219 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 TWF1Q12792 350 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 TAF12Q16514 161 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 TMEM199Q8N511 208 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 IPMKQ8NFU5 416 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ERLEC1Q96DZ1 483 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 HMCESQ96FZ2 354 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 BTN2A3PQ96KV6 586 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ATXN3LQ9H3M9 355 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 FANCEQ9HB96 536 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 CMTM6Q9NX76 183 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 SMPD4Q9NXE4 827 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ABCD2Q9UBJ2 740 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 FGF10O15520 208 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 KCNH1O95259 989 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 MT-ND1P03886 318 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 SLC2A3P11169 496 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 CAPN3P20807 821 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 RFC2P35250 354 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 POLD2P49005 469 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 EIF2B2P49770 351 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 HLCSP50747 726 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 KCNC4Q03721 635 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 GRSF1Q12849 480 aaKnown RBP eCLIP17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 LINC00523Q86TU6 105 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 IFNEQ86WN2 208 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 TRPV3Q8NET8 790 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 OR13F1Q8NGS4 319 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 C2orf15Q8WU43 125 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 C19orf60Q96EN9 201 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 HOPXQ9BPY8 73 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ZYG11BQ9C0D3 744 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ACTR3BQ9P1U1 418 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 YIPF1Q9Y548 306 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 RAD54BQ9Y620 910 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 KIAA0355O15063 1070 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ANGPT2O15123 496 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 TEX28O15482 410 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 SLC6A4P31645 630 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ATP5C1P36542 298 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 MAXP61244 160 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 BNIP2Q12982 314 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 TMEM53Q6P2H8 277 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 DENND1CQ8IV53 801 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 ATP6V0D2Q8N8Y2 350 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 BPIFB6Q8NFQ5 453 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 BADQ92934 168 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 CCDC126Q96EE4 140 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 OLFM1Q99784 485 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 C1orf50Q9BV19 199 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 GSTO2Q9H4Y5 243 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 RBM22Q9NW64 420 aaKnown RBP eCLIP17.04■□□□□ 0.323e-6■■■■■ 29.5
SCAMP4-201ENST00000316097 ACTL7AQ9Y615 435 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 SLC30A1Q9Y6M5 507 aa17.04■□□□□ 0.32
SCAMP4-201ENST00000316097 BBIP1A8MTZ0 92 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 SUPT7LO94864 414 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 URODP06132 367 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 HSD17B1P14061 328 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 GFAPP14136 432 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 CCNCP24863 283 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 ELK4P28324 431 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 ATP4BP51164 291 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 ZNF135P52742 658 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 MLLT10P55197 1068 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 MTA1Q13330 715 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 LDLRAP1Q5SW96 308 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 IGFN1Q86VF2 1251 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 PPHLN1Q8NEY8 458 aaKnown RBP17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 PSMG2Q969U7 264 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 SLC22A12Q96S37 553 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 VAT1Q99536 393 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 TBL1YQ9BQ87 522 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 TTLL2Q9BWV7 592 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 AKTIPQ9H8T0 292 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 RIC8BQ9NVN3 520 aa17.03■□□□□ 0.32
SCAMP4-201ENST00000316097 FBXO5Q9UKT4 447 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms