RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 TRIM45Q9H8W5 580 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-201ENST00000314191 PAPOLBQ9NRJ5 636 aaKnown RBP6.13□□□□□ -1.43
PRKDC-201ENST00000314191 HNRNPRO43390 633 aaKnown RBP6.13□□□□□ -1.43
PRKDC-201ENST00000314191 PEX2P28328 305 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 TM4SF4P48230 202 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 CLVS1Q8IUQ0 354 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-201ENST00000314191 C7orf61Q8IZ16 206 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 PNPT1Q8TCS8 783 aaKnown RBP6.13□□□□□ -1.43
PRKDC-201ENST00000314191 CASD1Q96PB1 797 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 WDR83Q9BRX9 315 aaKnown RBP6.13□□□□□ -1.43
PRKDC-201ENST00000314191 YIPF2Q9BWQ6 316 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 ELAC1Q9H777 363 aaKnown RBP6.13□□□□□ -1.43
PRKDC-201ENST00000314191 EBF2Q9HAK2 575 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 MCM8Q9UJA3 840 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 SNX8Q9Y5X2 465 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 DNAJA2O60884 412 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 ANXA6P08133 673 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 UQCRBP14927 111 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 GNPDA1P46926 289 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 DGKGP49619 791 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 TNK2Q07912 1038 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 LYPLAL1Q5VWZ2 237 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 C16orf87Q6PH81 154 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 KCNN1Q92952 543 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 TPD52L3Q96J77 140 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 PLCH1Q4KWH8 1693 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 CCDC189A1A4V9 331 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 ALDH1A2O94788 518 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 CARD16Q5EG05 197 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 EPGNQ6UW88 154 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 TMC5Q6UXY8 1006 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 TAS1R1Q7RTX1 841 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 PANX1Q96RD7 426 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 TLE6Q9H808 572 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 SLC28A3Q9HAS3 691 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 COL22A1Q8NFW1 1626 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-201ENST00000314191 ABHD14A-ACY1A0A1B0GW23 586 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 ANKDD1BA6NHY2 528 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 SCAMP1O15126 338 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 STC2O76061 302 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 ADSLP30566 484 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-201ENST00000314191 CHN2P52757 468 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 THOP1P52888 689 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 CAP1Q01518 475 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 HMGCS1Q01581 520 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 PPIGQ13427 754 aaKnown RBP eCLIP6.13□□□□□ -1.431e-6■■□□□ 12.7
PRKDC-201ENST00000314191 GTF2H2Q13888 395 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 GTF2H2CQ6P1K8 395 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 Q6ZVU0 165 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 OR2T12Q8NG77 320 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 SMIM14Q96QK8 99 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 RIOK2Q9BVS4 552 aaKnown RBP6.13□□□□□ -1.43
PRKDC-201ENST00000314191 TMCO1Q9UM00 188 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 PSMD13Q9UNM6 376 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 U3KQV3 271 aa6.13□□□□□ -1.43
PRKDC-201ENST00000314191 SDHDO14521 159 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 T-ENOLP0DO92 83 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 NAE1Q13564 534 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 KCNA7Q96RP8 456 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 RTP3Q9BQQ7 232 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 GRIP2Q9C0E4 1043 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 MTRRQ9UBK8 725 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 PAPSS2O95340 614 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-201ENST00000314191 DDX5P17844 614 aaKnown RBP6.12□□□□□ -1.43
PRKDC-201ENST00000314191 STC1P52823 247 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 TRIM25Q14258 630 aaKnown RBP6.12□□□□□ -1.43
PRKDC-201ENST00000314191 TECRLQ5HYJ1 363 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 ZNF678Q5SXM1 525 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 GPR141Q7Z602 305 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 OTULINQ96BN8 352 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 DOLKQ9UPQ8 538 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 ATP6V1E1P36543 226 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 HERVK_113P63132 956 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 DSC3Q14574 896 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 ADCY4Q8NFM4 1077 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 HIC2Q96JB3 615 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 ERVK-6Q9BXR3 956 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 E7ENX8 843 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 CAPN15O75808 1086 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 CYP2A13Q16696 494 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 RNF220Q5VTB9 566 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 ZCCHC8Q6NZY4 707 aaKnown RBP6.12□□□□□ -1.43
PRKDC-201ENST00000314191 DSG4Q86SJ6 1040 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 WRAP53Q9BUR4 548 aaKnown RBP6.12□□□□□ -1.43
PRKDC-201ENST00000314191 C9orf16Q9BUW7 83 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 ROGDIQ9GZN7 287 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 USP3Q9Y6I4 520 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 OAS1P00973 400 aaKnown RBP6.12□□□□□ -1.43
PRKDC-201ENST00000314191 IGFBP4P22692 258 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 ARSIQ5FYB1 569 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 MAPK15Q8TD08 544 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 PPP1R16AQ96I34 528 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 FFAR2O15552 330 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 PRDX6P30041 224 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 CRATP43155 626 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 PWP1Q13610 501 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 TMEM26Q6ZUK4 368 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 GET4Q7L5D6 327 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-201ENST00000314191 KLHDC9Q8NEP7 349 aa6.12□□□□□ -1.43
PRKDC-201ENST00000314191 PPM1HQ9ULR3 514 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms