RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 EID2BQ96D98 161 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 IMP4Q96G21 291 aaKnown RBP8.05□□□□□ -1.12
TPM3-203ENST00000312970 TEFMQ96QE5 360 aaKnown RBP8.05□□□□□ -1.12
TPM3-203ENST00000312970 SRPK1Q96SB4 655 aaKnown RBP8.05□□□□□ -1.12
TPM3-203ENST00000312970 DNAJC7Q99615 494 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 USB1Q9BQ65 265 aaKnown RBP8.05□□□□□ -1.12
TPM3-203ENST00000312970 ZPBPQ9BS86 351 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 HERPUD2Q9BSE4 406 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 ZSCAN5AQ9BUG6 496 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 SPATA16Q9BXB7 569 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 SLC12A9Q9BXP2 914 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 BRD8Q9H0E9 1235 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 SLC25A51Q9H1U9 297 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 EPB41L1Q9H4G0 881 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 MAGEE1Q9HCI5 957 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 FBXO8Q9NRD0 319 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 RAD18Q9NS91 495 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 STARD5Q9NSY2 213 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 ATXN10Q9UBB4 475 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 KCNK6Q9Y257 313 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 PCYT1BQ9Y5K3 369 aaPredicted RBP8.05□□□□□ -1.12
TPM3-203ENST00000312970 HEMK1Q9Y5R4 338 aaPredicted RBP8.05□□□□□ -1.12
TPM3-203ENST00000312970 CREBBPQ92793 2442 aa8.05□□□□□ -1.12
TPM3-203ENST00000312970 ZFC3H1O60293 1989 aaKnown RBP8.04□□□□□ -1.12
TPM3-203ENST00000312970 A6NCN8 305 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 C3orf70A6NLC5 250 aaPredicted RBP8.04□□□□□ -1.12
TPM3-203ENST00000312970 APOL1O14791 398 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 PPP1R12AO14974 1030 aaPredicted RBP8.04□□□□□ -1.12
TPM3-203ENST00000312970 KMOO15229 486 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 CAPN5O15484 640 aaPredicted RBP8.04□□□□□ -1.12
TPM3-203ENST00000312970 CBFA2T2O43439 604 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 TPM1P09493 284 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 FAM87AP0C7U9 286 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 ZNF8P17098 575 aaPredicted RBP8.04□□□□□ -1.12
TPM3-203ENST00000312970 ITGB6P18564 788 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 XRCC1P18887 633 aaPredicted RBP8.04□□□□□ -1.12
TPM3-203ENST00000312970 MAP4P27816 1152 aaKnown RBP8.04□□□□□ -1.12
TPM3-203ENST00000312970 DCDC1P59894 354 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 CDK18Q07002 472 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 ZBTB17Q13105 803 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 GALNT3Q14435 633 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 TEX44Q53QW1 395 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 LRRC38Q5VT99 294 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 ANKS6Q68DC2 871 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 PDPK2PQ6A1A2 396 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 CEACAM20Q6UY09 585 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 BZW1Q7L1Q6 419 aaKnown RBP8.04□□□□□ -1.12
TPM3-203ENST00000312970 ADGRG6Q86SQ4 1221 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 RFX6Q8HWS3 928 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 PLXDC1Q8IUK5 500 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 PHYKPLQ8IUZ5 450 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 RHOT2Q8IXI1 618 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 TRAM1L1Q8N609 369 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 BMPERQ8N8U9 685 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 GPR26Q8NDV2 337 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 PMEPA1Q969W9 287 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 CCDC42Q96M95 316 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 AGAP3Q96P47 875 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 TRIB3Q96RU7 358 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 GPR63Q9BZJ6 419 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 SPRY4Q9C004 299 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 TRIM4Q9C037 500 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 BRINP2Q9C0B6 783 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 OR2AG1Q9H205 316 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 PRDM8Q9NQV8 689 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 KLC4Q9NSK0 619 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 DDX56Q9NY93 547 aaKnown RBP8.04□□□□□ -1.12
TPM3-203ENST00000312970 CPNE7Q9UBL6 633 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 PILRAQ9UKJ1 303 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 SHOC2Q9UQ13 582 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 SDK2Q58EX2 2172 aa8.04□□□□□ -1.12
TPM3-203ENST00000312970 ANKRD17O75179 2603 aaKnown RBP8.03□□□□□ -1.12
TPM3-203ENST00000312970 CHUKO15111 745 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 VEGFDO43915 354 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 RAD1O60671 282 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 MTA2O94776 668 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 VIPP01282 170 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 PIRTP0C851 137 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 LIFP15018 202 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 ZNF7P17097 686 aaPredicted RBP8.03□□□□□ -1.12
TPM3-203ENST00000312970 PTMSP20962 102 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 SLC1A1P43005 524 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 MAPK9P45984 424 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 NR2C2P49116 596 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 SLC14A2Q15849 920 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 PCSK7Q16549 785 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 ZNF569Q5MCW4 686 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 FAM182AQ5T1J6 154 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 ZNF648Q5T619 568 aaPredicted RBP8.03□□□□□ -1.12
TPM3-203ENST00000312970 ALS2CLQ60I27 953 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 ALKBH2Q6NS38 261 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 BORAQ6PGQ7 559 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 NPNTQ6UXI9 565 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 ATG14Q6ZNE5 492 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 RHOT1Q8IXI2 618 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 NLGN4XQ8N0W4 816 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 NLGN4YQ8NFZ3 816 aaPredicted RBP8.03□□□□□ -1.12
TPM3-203ENST00000312970 SPATA22Q8NHS9 363 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 HTR3CQ8WXA8 447 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 GLYATL1Q969I3 302 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms